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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB12237" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12237 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10223402 10223402 PRJEB12237_P_NODE_10469_length_164_cov_1.224806_g10273_i0 PRJEB12237 10469 164 1.224806 2.00868184 Polychytrium aggregatum 110093 Fungi Fungi 126 7.9499999999999995e-25   NTclustered gi|2432151864|ref|XM_053111326.1| 110093 g10273 i0 81.579 4.17073170731707 152 28 93 0 8 159 472 623 Polychytrium aggregatum glucosamine-6-phosphate isomerase (BJ171DRAFT_508873), mRNA blastn 684 126 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10223413 10223413 PRJEB12237_P_NODE_11789_length_153_cov_1.016949_g11593_i0 PRJEB12237 11789 153 1.016949 1.55593197 Fimicolochytrium jonesii 1396493 Fungi Fungi 152 1.1999999999999999e-32   NTclustered gi|2432057423|ref|XM_053069416.1| 1396493 g11593 i0 84.868 94.156862745098 152 21 99 2 3 153 537 387 Fimicolochytrium jonesii hsp71-like protein (EV422DRAFT_516945), mRNA blastn 14406 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
17872349 17872349 PRJEB12237_P_NODE_9615_length_173_cov_1.159420_g9419_i0 PRJEB12237 9615 173 1.15942 2.0057966 Polychytrium aggregatum 110093 Fungi Fungi 128 2.35e-25   NTclustered gi|2432157378|ref|XM_053107751.1| 110093 g9419 i0 88.073 2.4971098265896 109 11 62 2 59 166 294 187 Polychytrium aggregatum ribosomal protein L6, alpha-beta domain-containing protein (BJ171DRAFT_426015), partial mRNA blastn 432 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18837429 18837429 PRJEB12237_P_NODE_7975_length_195_cov_5.218750_g7779_i0 PRJEB12237 7975 195 5.21875 10.1765625 Chytridiomycota 4761 Fungi Fungi 78.7 2.78e-10   NTclustered gi|2432146664|ref|XM_053113161.1| 110093 g7779 i0 86.957 13.2615384615385 69 9 35 0 127 195 393 325 Polychytrium aggregatum 40S ribosomal protein S22-A (BJ171DRAFT_558627), partial mRNA blastn 2586 78.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20421354 20421354 PRJEB12237_P_NODE_6037_length_238_cov_2.157635_g5841_i0 PRJEB12237 6037 238 2.157635 5.1351713 Polychytrium aggregatum 110093 Fungi Fungi 104 5.82e-18   NTclustered gi|2432155690|ref|XM_053111537.1| 110093 g5841 i0 84.615 0.436974789915966 104 16 44 0 50 153 1232 1335 Polychytrium aggregatum mitochondrial carrier domain-containing protein (BJ171DRAFT_511047), mRNA blastn 104 104 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22972660 22972660 PRJEB12237_P_NODE_2999_length_396_cov_1.991690_g2803_i0 PRJEB12237 2999 396 1.99169 7.8870924 Polychytrium aggregatum 110093 Fungi Fungi 283 1.23e-71   NTclustered gi|2432145256|ref|XM_053110808.1| 110093 g2803 i0 79.545 98.5732323232323 396 81 100 0 1 396 1259 864 Polychytrium aggregatum hsp71-like protein (BJ171DRAFT_502900), mRNA blastn 39035 283 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;