RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJEB11748 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1291790 1291790 PRJEB11748_P_NODE_286322_length_226_cov_3.800000_g284139_i0 PRJEB11748 286322 226 3.8 8.588 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 182 2.46e-41   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g284139 i0 81.659 7.47787610619469 229 33 98 9 5 226 88810 89036 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 1690 182 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
1293243 1293243 PRJEB11748_P_NODE_375582_length_183_cov_4.852459_g373399_i0 PRJEB11748 375582 183 4.852459 8.87999997 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 130 7e-26   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g373399 i0 84.615 2.12568306010929 130 20 71 0 52 181 438205 438334 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 389 130 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
2568814 2568814 PRJEB11748_P_NODE_36823_length_722_cov_4.021180_g34855_i0 PRJEB11748 36823 722 4.02118 29.0329196 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 617 5.68e-172   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g34855 i0 88.694 66.6925207756233 513 48 70 9 24 531 112163 112670 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 48152 617 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
6394895 6394895 PRJEB11748_P_NODE_247006_length_249_cov_0.968085_g244823_i0 PRJEB11748 247006 249 0.968085 2.41053165 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 316 7.239999999999998e-82   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g244823 i0 89.412 96.5622489959839 255 21 100 6 1 249 77601 77855 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 24044 316 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14043046 14043046 PRJEB11748_P_NODE_155772_length_328_cov_5.138577_g153590_i0 PRJEB11748 155772 328 5.138577 16.85453256 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 187 8.11e-43   NTclustered gi|2416250577|dbj|AP025523.1| 3016050 g153590 i0 80.377 21.6585365853659 265 37 77 14 35 288 3336989 3337249 Vulcanimicrobium alpinum WC8-2 DNA, complete genome blastn 7104 187 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum
21695945 21695945 PRJEB11748_P_NODE_42578_length_665_cov_3.385762_g40522_i0 PRJEB11748 42578 665 3.385762 22.5153173 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 372 4.48e-98   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g40522 i0 78.642 61.3428571428571 604 98 89 29 48 636 103340 103927 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 40793 372 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;