RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
983078 983078 PRJEB11748_P_NODE_157841_length_326_cov_1.883019_g155659_i0 PRJEB11748 157841 326 1.883019 6.13864194 root 1 Root_unresolved Root_unresolved 518 2.51e-142   NTclustered gi|373125855|gb|JN567036.1| 29281 g155659 i0 97.097 96.9938650306748 310 3 94 5 1 307 582 276 Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence blastn 31620 518 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
1293914 1293914 PRJEB11748_P_NODE_58882_length_554_cov_7.847870_g56753_i0 PRJEB11748 58882 554 7.84787 43.4771998 uncultured crenarchaeote 76h13 684059 Archaea Archaea 516 1.61e-141   NTclustered gi|262089314|gb|GU059108.1| 684059 g56753 i0 85.802 1.76353790613718 486 69 88 0 5 490 14398 13913 Uncultured crenarchaeote 76h13 genomic sequence blastn 977 516 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 76h13
18836112 18836112 PRJEB11748_P_NODE_315895_length_212_cov_2.721854_g313712_i0 PRJEB11748 315895 212 2.721854 5.77033048 Thermoproteati 1783275 Archaea Archaea 353 4.56e-93   NTclustered gi|22797874|emb|AJ496176.1| 29281 g313712 i0 99.485 20.377358490566 194 1 92 0 1 194 7326 7133 Uncultured crenarchaeote 34 kb genomic fragment blastn 4320 353 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;