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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB11748 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
984521 984521 PRJEB11748_P_NODE_344781_length_200_cov_48.748201_g342598_i0 PRJEB11748 344781 200 48.748201 97.496402 Melioribacter 1134403 Bacteria Bacteria 261 2.65e-65   NTclustered gi|470490269|ref|NR_076978.1| 1134405 g342598 i0 95.181 42.81 166 6 83 2 1 165 870 706 Melioribacter roseus strain P3M-2 23S ribosomal RNA gene, complete sequence blastn 8562 261 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Melioribacter Melioribacter roseus
1290517 1290517 PRJEB11748_P_NODE_217622_length_269_cov_4.519231_g215439_i0 PRJEB11748 217622 269 4.5192310000000004 12.15673139 Ignavibacterium sp. 2651167 Bacteria Bacteria 259 1.35e-64   NTclustered gi|2314740639|dbj|AP026678.1| 2651167 g215439 i0 87.225 0.843866171003718 227 29 84 0 19 245 2371153 2371379 MAG: Ignavibacterium sp. KatS3mg037 DNA, complete genome blastn 227 259 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
7360781 7360781 PRJEB11748_P_NODE_154686_length_329_cov_12.160448_g152504_i0 PRJEB11748 154686 329 12.160448 40.00787392 Melioribacter 1134403 Bacteria Bacteria 255 2.2e-63   NTclustered gi|470490269|ref|NR_076978.1| 1134405 g152504 i0 86.695 106.185410334346 233 27 70 3 74 302 1806 1574 Melioribacter roseus strain P3M-2 23S ribosomal RNA gene, complete sequence blastn 34935 257 0.992217898832685 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Melioribacter Melioribacter roseus
9912704 9912704 PRJEB11748_P_NODE_346548_length_200_cov_2.057554_g344365_i0 PRJEB11748 346548 200 2.057554 4.115108 Ignavibacterium 795750 Bacteria Bacteria 292 9.4e-75   NTclustered gi|470490116|ref|NR_076968.1| 591197 g344365 i0 94.271 86.35 192 10 96 1 1 192 1710 1900 Ignavibacterium album strain Mat9-16 23S ribosomal RNA gene, complete sequence blastn 17270 292 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
15319317 15319317 PRJEB11748_P_NODE_260493_length_240_cov_9.983240_g258310_i0 PRJEB11748 260493 240 9.98324 23.959776 Ignavibacterium album 591197 Bacteria Bacteria 180 9.49e-41   NTclustered gi|383800634|gb|CP003418.1| 945713 g258310 i0 81.735 1.44583333333333 219 37 91 3 2 219 445568 445784 Ignavibacterium album JCM 16511, complete genome blastn 347 180 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
18836125 18836125 PRJEB11748_P_NODE_317255_length_211_cov_11.526667_g315072_i0 PRJEB11748 317255 211 11.526667 24.32126737 Pseudomonadati 3379134 Bacteria Bacteria 169 1.7599999999999998e-37   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g315072 i0 95.37 105.327014218009 108 2 50 3 1 106 1602364 1602258 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 22224 169 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
19141635 19141635 PRJEB11748_P_NODE_212176_length_273_cov_18.745283_g209993_i0 PRJEB11748 212176 273 18.745283 51.17462259 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 220 6.49e-53   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g209993 i0 82.879 51.5018315018315 257 32 92 12 24 273 2846047 2845796 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 14060 220 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;