RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11491936 11491936 PRJEB11748_P_NODE_107230_length_402_cov_17.014663_g105056_i0 PRJEB11748 107230 402 17.014663 68.39894526 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 110 2.25e-19   NTclustered gi|1752362050|ref|XM_030985729.1| 7668 g105056 i0 93.333 1.14427860696517 75 4 20 1 122 195 1674 1600 PREDICTED: Strongylocentrotus purpuratus clathrin interactor 1 (LOC580579), transcript variant X3, mRNA blastn 460 110 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
20109152 20109152 PRJEB11748_P_NODE_109516_length_398_cov_3.192878_g107342_i0 PRJEB11748 109516 398 3.192878 12.70765444 root 1 Root_unresolved Root_unresolved 69.4 3.78e-7   NTclustered gi|2919542517|ref|XM_071621156.1| 105358 g107342 i0 91.837 19.0326633165829 49 4 12 0 207 255 815 767 PREDICTED: Diadema antillarum uncharacterized protein (LOC139709207), mRNA blastn 7575 69.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;