RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8942169 8942169 PRJEB11748_P_NODE_166168_length_316_cov_5.858824_g163985_i0 PRJEB11748 166168 316 5.858824 18.51388384 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 298 3.44e-76   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g163985 i0 86.063 63.2658227848101 287 29 89 7 28 307 965517 965235 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 19992 298 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
8945340 8945340 PRJEB11748_P_NODE_337528_length_203_cov_5.690141_g335345_i0 PRJEB11748 337528 203 5.690141 11.55098623 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 132 2.21e-26   NTclustered gi|2258866441|gb|CP060228.1| 2052152 g335345 i0 82.099 86.7487684729064 162 21 78 6 1 159 249922 250078 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-23 chromosome blastn 17610 132 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
15317713 15317713 PRJEB11748_P_NODE_177953_length_304_cov_2.168724_g175770_i0 PRJEB11748 177953 304 2.168724 6.59292096 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 475 1.4199999999999997e-129   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g175770 i0 96.516 102.207236842105 287 10 94 0 18 304 961662 961948 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 31071 475 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
24243305 24243305 PRJEB11748_P_NODE_284540_length_227_cov_3.228916_g282357_i0 PRJEB11748 284540 227 3.228916 7.32963932 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 296 8.46e-76   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g282357 i0 92.718 43.3215859030837 206 13 90 2 1 204 964643 964848 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 9834 296 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;