RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11498528 11498528 PRJEB11748_P_NODE_94250_length_431_cov_2.408108_g92082_i0 PRJEB11748 94250 431 2.408108 10.37894548 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 8.94e-4   NTclustered gi|2794974794|ref|XM_067862723.1| 2049356 g92082 i0 97.143 0.28538283062645 35 0 8 1 1 34 9093 9059 Monocercomonoides exilis Exocyst complex component Sec5 (MONOS_10283), partial mRNA blastn 123 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
25209872 25209872 PRJEB11748_P_NODE_242380_length_252_cov_1.230366_g240197_i0 PRJEB11748 242380 252 1.230366 3.10052232 Paratrimastix 1709327 Preaxostyla other_Eukaryota 141 4.74e-29   NTclustered gi|14348576|gb|AF244904.1|AF244904 137421 g240197 i0 88.235 11.9126984126984 119 13 47 1 118 236 1540 1657 Trimastix pyriformis ATCC50598 small subunit ribosomal RNA gene, complete sequence blastn 3002 141 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis ATCC50598

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;