RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB11748" and tax_clade = "Candidatus Porisulfidus"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Porisulfidus · 2 ✖

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6392564 6392564 PRJEB11748_P_NODE_127606_length_366_cov_8.750820_g125429_i0 PRJEB11748 127606 366 8.75082 32.0280012 uncultured candidatus Porisulfidus sp. 3039487 Bacteria Bacteria 139 2.59e-28   NTclustered gi|2626255597|emb|OY843752.1| 3039487 g125429 i0 84.354 21.6612021857923 147 17 39 4 33 174 1553387 1553242 MAG: uncultured candidatus Porisulfidus sp. isolate e629978e-7072-48df-9c22-0ee86b3b6d73 genome assembly, chromosome: 1 blastn 7928 139 1 Bacteria Candidatus Porisulfidus Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales     uncultured candidatus Porisulfidus sp.
17866528 17866528 PRJEB11748_P_NODE_145635_length_341_cov_1.682143_g143455_i0 PRJEB11748 145635 341 1.682143 5.73610763 uncultured candidatus Porisulfidus sp. 3039487 Bacteria Bacteria 128 5.2e-25   NTclustered gi|2621706121|emb|OY764335.1| 3039487 g143455 i0 80.982 57.4985337243402 163 29 48 2 106 267 489306 489145 MAG: uncultured candidatus Porisulfidus sp. isolate 93d2c08f-77fa-417a-97c6-1065e5bfdc34 genome assembly, chromosome: 1 blastn 19607 128 1 Bacteria Candidatus Porisulfidus Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales     uncultured candidatus Porisulfidus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;