RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB11523" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB11523 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11491744 11491744 PRJEB11523_P_NODE_670_length_738_cov_37.985486_g607_i0 PRJEB11523 670 738 37.985486 280.33288668 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 876 0   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g607 i0 89.971 0.91869918699187 678 68 92 0 36 713 74085 74762 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 678 876 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
16590636 16590636 PRJEB11523_P_NODE_6834_length_175_cov_14.142857_g6756_i0 PRJEB11523 6834 175 14.142857 24.74999975 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 228 2.2799999999999996e-55   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g6756 i0 93.464 49.5828571428571 153 10 87 0 23 175 964795 964643 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 8677 228 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
17865527 17865527 PRJEB11523_P_NODE_6915_length_174_cov_15.312000_g6837_i0 PRJEB11523 6915 174 15.312 26.64288 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 202 1.3699999999999998e-47   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g6837 i0 90.728 0.867816091954023 151 14 87 0 3 153 163970 164120 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 151 202 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;