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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10320 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13573 13573 PRJEB10320_P_NODE_5741_length_439_cov_3.264851_g5490_i0 PRJEB10320 5741 439 3.264851 14.33269589 Brachionus rubens 392764 Rotifera other_Eukaryota 364 4.7999999999999996e-96   NTclustered gi|1802791203|gb|MN256532.1| 392764 g5490 i0 81.777 83.4874715261959 439 76 99 4 1 437 1070 634 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 36651 364 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
1287857 1287857 PRJEB10320_P_NODE_762_length_1133_cov_15.763206_g653_i0 PRJEB10320 762 1133 15.763206 178.59712398 Brachionus rubens 392764 Rotifera other_Eukaryota 409 5.939999999999999e-109   NTclustered gi|1802791198|gb|MN256531.1| 392764 g653 i0 76.854 13.297440423654 782 146 68 30 357 1121 11079 11842 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 15066 409 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
2563382 2563382 PRJEB10320_P_NODE_13503_length_254_cov_1.593607_g13245_i0 PRJEB10320 13503 254 1.593607 4.04776178 Brachionus koreanus 1199090 Rotifera other_Eukaryota 143 1.33e-29   NTclustered gi|477541861|gb|KC603850.1| 1199090 g13245 i0 78.151 29.3149606299213 238 42 92 10 22 254 6775 7007 Brachionus sp. 'koreanus' chromosome II mitochondrion, complete sequence blastn 7446 143 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
2563454 2563454 PRJEB10320_P_NODE_4563_length_499_cov_3.010776_g4326_i0 PRJEB10320 4563 499 3.010776 15.02377224 Brachionus plicatilis 10195 Rotifera other_Eukaryota 285 4.42e-72   NTclustered gi|218117260|emb|AM980958.1| 10195 g4326 i0 82.371 1.70140280561122 329 56 66 2 47 374 401 74 Brachionus plicatilis partial mRNA for 40S ribosomal protein S11, (RPS11 gene) blastn 849 285 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
5115891 5115891 PRJEB10320_P_NODE_18085_length_206_cov_9.619883_g17827_i0 PRJEB10320 18085 206 9.619883 19.81695898 Cephalodella gibba 231616 Rotifera other_Eukaryota 311 2.69e-80   NTclustered gi|37788188|gb|AY218141.1| 231616 g17827 i0 93.78 102.529126213592 209 9 99 3 2 206 213 5 Cephalodella gibba 28S ribosomal RNA gene, partial sequence blastn 21121 311 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Cephalodella Cephalodella gibba
8635575 8635575 PRJEB10320_P_NODE_4227_length_520_cov_4.243299_g3992_i0 PRJEB10320 4227 520 4.243299 22.0651548 Ploima 84394 Rotifera other_Eukaryota 399 1.5799999999999998e-106   NTclustered gi|1896828520|gb|MT211653.1| 1708513 g3992 i0 81.933 83.2557692307692 476 82 91 4 41 514 476 3 Asplanchna intermedia voucher BUZOODST-P-Aim cytochrome c oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 43293 399 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna intermedia
12461554 12461554 PRJEB10320_P_NODE_13190_length_258_cov_1.762332_g12932_i0 PRJEB10320 13190 258 1.762332 4.54681656 Ploima 84394 Rotifera other_Eukaryota 377 3.41e-100   NTclustered gi|61200802|gb|AY829083.1| 96446 g12932 i0 93.676 97.7364341085271 253 15 98 1 6 258 1694 1443 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 25216 379 0.994722955145119 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
14041669 14041669 PRJEB10320_P_NODE_6852_length_395_cov_1.463889_g6597_i0 PRJEB10320 6852 395 1.463889 5.78236155 Brachionus plicatilis 10195 Rotifera other_Eukaryota 272 2.6699999999999993e-68   NTclustered gi|567315823|dbj|AB775784.1| 10195 g6597 i0 81.306 6.35443037974684 337 61 85 2 60 395 1903 1568 Brachionus plicatilis hsp70-1 mRNA for heat shock 70 kDa protein 1, complete cds blastn 2510 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
15315713 15315713 PRJEB10320_P_NODE_12033_length_274_cov_3.112971_g11775_i0 PRJEB10320 12033 274 3.112971 8.52954054 Cephalodella forficula 360656 Rotifera other_Eukaryota 473 4.53e-129   NTclustered gi|83285081|gb|DQ297693.1| 360656 g11775 i0 97.81 100 274 6 100 0 1 274 613 886 Cephalodella forficula 18S ribosomal RNA gene, partial sequence blastn 27400 473 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Cephalodella Cephalodella forficula
22965443 22965443 PRJEB10320_P_NODE_5419_length_454_cov_6.988067_g5170_i0 PRJEB10320 5419 454 6.988067 31.72582418 Mytilina ventralis 360682 Rotifera other_Eukaryota 520 9.999999999999999e-143   NTclustered gi|83285200|gb|DQ297747.1| 360682 g5170 i0 87.309 79.068281938326 457 54 100 4 1 454 271 726 Mytilina ventralis 28S ribosomal RNA gene, partial sequence blastn 35897 520 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Mytilina Mytilina ventralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;