RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB10320 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1287867 1287867 PRJEB10320_P_NODE_9942_length_311_cov_2.293478_g9684_i0 PRJEB10320 9942 311 2.293478 7.13271658 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 392 1.51e-104   NTclustered gi|226347408|gb|FJ807243.1| 56466 g9684 i0 89.389 40.4501607717042 311 33 100 0 1 311 965 1275 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 12580 392 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
2563380 2563380 PRJEB10320_P_NODE_13023_length_260_cov_1.813333_g12765_i0 PRJEB10320 13023 260 1.813333 4.7146658 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 329 9.77e-86   NTclustered gi|427188201|dbj|AB757706.1| 56466 g12765 i0 89.575 0.996153846153846 259 27 99 0 2 260 187 445 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 259 329 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
2563388 2563388 PRJEB10320_P_NODE_15303_length_232_cov_2.233503_g15045_i0 PRJEB10320 15303 232 2.233503 5.18172696 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 361 3.03e-95   NTclustered gi|27461806|gb|AY130826.1| 56466 g15045 i0 94.828 1 232 10 99 2 2 232 889 659 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 232 361 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
5115898 5115898 PRJEB10320_P_NODE_18465_length_204_cov_1.319527_g18207_i0 PRJEB10320 18465 204 1.319527 2.69183508 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 279 7.5e-71   NTclustered gi|226347408|gb|FJ807243.1| 56466 g18207 i0 91.584 94.5049019607843 202 17 99 0 1 202 883 682 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 19279 279 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
8940471 8940471 PRJEB10320_P_NODE_1368_length_891_cov_2.244159_g1219_i0 PRJEB10320 1368 891 2.244159 19.99545669 Rhynchobodo ATCC50359 51334 Euglenozoa other_Eukaryota 678 0   NTclustered gi|226347448|gb|FJ807264.1| 51334 g1219 i0 80.587 66.8956228956229 886 164 99 8 1 882 18 899 Rhynchobodo ATCC50359 elongation factor 1 alpha gene, partial cds blastn 59604 678 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo ATCC50359
11491502 11491502 PRJEB10320_P_NODE_15970_length_225_cov_2.152632_g15712_i0 PRJEB10320 15970 225 2.152632 4.843422 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 333 6.379999999999999e-87   NTclustered gi|427188201|dbj|AB757706.1| 56466 g15712 i0 93.333 1 225 15 100 0 1 225 710 934 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 225 333 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
11491577 11491577 PRJEB10320_P_NODE_8230_length_352_cov_1.593060_g7972_i0 PRJEB10320 8230 352 1.59306 5.6075712 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 333 1.06e-86   NTclustered gi|110589646|gb|DQ683345.1| 56466 g7972 i0 89.922 22.1335227272727 258 26 99 0 2 259 899 642 Peranema trichophorum Hsp90 gene, partial cds blastn 7791 333 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
20414171 20414171 PRJEB10320_P_NODE_26577_length_157_cov_1.549180_g26319_i0 PRJEB10320 26577 157 1.54918 2.4322126 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 224 2.5899999999999994e-54   NTclustered gi|226347408|gb|FJ807243.1| 56466 g26319 i0 91.083 1 157 14 100 0 1 157 709 553 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 157 224 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22965414 22965414 PRJEB10320_P_NODE_24179_length_168_cov_1.203008_g23921_i0 PRJEB10320 24179 168 1.203008 2.02105344 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 228 2.179999999999999e-55   NTclustered gi|226347408|gb|FJ807243.1| 56466 g23921 i0 91.975 91.8095238095238 162 13 96 0 7 168 1 162 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 15424 228 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;