RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10320 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3839696 3839696 PRJEB10320_P_NODE_17284_length_213_cov_2.342697_g17026_i0 PRJEB10320 17284 213 2.342697 4.98994461 Halitholus cirratus 1622219 Cnidaria other_Eukaryota 115 2.36e-21   NTclustered gi|766544753|gb|KP113580.1| 1622219 g17026 i0 75.385 46 195 43 90 5 1 191 8 201 Halitholus cirratus isolate C histone H3 (H3) gene, partial cds blastn 9798 115 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Pandeidae Halitholus Halitholus cirratus
12461556 12461556 PRJEB10320_P_NODE_13430_length_255_cov_1.518182_g13172_i0 PRJEB10320 13430 255 1.518182 3.8713641 Pocillopora 46730 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|1524871334|ref|XM_027187216.1| 46731 g13172 i0 100 0.219607843137255 28 0 11 0 94 121 408 381 PREDICTED: Pocillopora damicornis replication stress response regulator SDE2-like (LOC113671008), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;