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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10320 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3839708 3839708 PRJEB10320_P_NODE_20764_length_187_cov_2.631579_g20506_i0 PRJEB10320 20764 187 2.631579 4.92105273 Fimicolochytrium jonesii 1396493 Fungi Fungi 135 1.55e-27   NTclustered gi|2432053428|ref|XM_053069235.1| 1396493 g20506 i0 84.173 2.72727272727273 139 22 74 0 22 160 237 99 Fimicolochytrium jonesii ribosomal protein L37a (EV422DRAFT_514394), mRNA blastn 510 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
4810388 4810388 PRJEB10320_P_NODE_27744_length_153_cov_1.228814_g27486_i0 PRJEB10320 27744 153 1.228814 1.88008542 Opisthokonta 33154 Fungi Fungi 62.1 2.08e-5   NTclustered gi|1866582795|gb|MT730970.1| 4814 g27486 i0 100 22 33 0 22 0 121 153 4441 4473 Chytriomyces hyalinus isolate PLAUS Ob-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3366 62.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
5115962 5115962 PRJEB10320_P_NODE_7085_length_386_cov_1.962963_g6830_i0 PRJEB10320 7085 386 1.962963 7.57703718 Polychytrium aggregatum 110093 Fungi Fungi 305 2.56e-78   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g6830 i0 82.173 83.7253886010363 359 60 92 4 29 385 904 548 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 32318 305 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7665784 7665784 PRJEB10320_P_NODE_23847_length_169_cov_1.791045_g23589_i0 PRJEB10320 23847 169 1.791045 3.02686605 Fimicolochytrium jonesii 1396493 Fungi Fungi 100 4.97e-17   NTclustered gi|2432051426|ref|XM_053072055.1| 1396493 g23589 i0 89.744 0.461538461538462 78 8 46 0 59 136 382 459 Fimicolochytrium jonesii ribosomal family S4e-domain-containing protein (EV422DRAFT_563332), partial mRNA blastn 78 100 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
10216307 10216307 PRJEB10320_P_NODE_21689_length_182_cov_1.088435_g21431_i0 PRJEB10320 21689 182 1.088435 1.9809517 Spizellomyces punctatus 109760 Fungi Fungi 86.1 1.53e-12   NTclustered gi|1026981961|ref|XM_016752543.1| 645134 g21431 i0 91.803 0.335164835164835 61 5 34 0 1 61 89 149 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S30 (SPPG_04300), mRNA blastn 61 86.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
11491541 11491541 PRJEB10320_P_NODE_24710_length_165_cov_1.846154_g24452_i0 PRJEB10320 24710 165 1.846154 3.0461541 Fimicolochytrium jonesii 1396493 Fungi Fungi 183 4.69e-42   NTclustered gi|2432052758|ref|XM_053073165.1| 1396493 g24452 i0 86.667 58.0848484848485 165 22 100 0 1 165 364 200 Fimicolochytrium jonesii ribosomal protein S12 (EV422DRAFT_572964), partial mRNA blastn 9584 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;