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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10320 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
982420 982420 PRJEB10320_P_NODE_1481_length_863_cov_2.152174_g1328_i0 PRJEB10320 1481 863 2.152174 18.57326162 Anas 8835 Chordata Chordata 54.7 0.024   NTclustered gi|1944703830|ref|XR_005262821.1| 8839 g1328 i0 100 0.168018539976825 29 0 3 0 212 240 3673 3701 PREDICTED: Anas platyrhynchos uncharacterized LOC119715588 (LOC119715588), ncRNA blastn 145 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Anseriformes Anatidae Anas Anas platyrhynchos
2257662 2257662 PRJEB10320_P_NODE_11362_length_285_cov_1.804000_g11104_i0 PRJEB10320 11362 285 1.804 5.1414 Aves 8782 Chordata Chordata 52.8 0.026   NTclustered gi|2919603530|emb|OZ238777.1| 9079 g11104 i0 100 0.196491228070175 28 0 10 0 90 117 9687606 9687579 Alectoris rufa genome assembly, chromosome: 12 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Alectoris Alectoris rufa
3533086 3533086 PRJEB10320_P_NODE_20423_length_190_cov_1.032258_g20165_i0 PRJEB10320 20423 190 1.032258 1.9612902 Mammalia 40674 Chordata Chordata 124 3.4099999999999995e-24   NTclustered gi|2871700473|ref|XM_070456764.1| 9874 g20165 i0 78.756 100.921052631579 193 35 100 6 1 190 600 411 PREDICTED: Odocoileus virginianus heat shock 70 kDa protein 1B (LOC110139419), mRNA blastn 19175 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
3533090 3533090 PRJEB10320_P_NODE_22343_length_178_cov_1.118881_g22085_i0 PRJEB10320 22343 178 1.118881 1.99160818 Laridae 8910 Chordata Chordata 52.8 0.015   NTclustered gi|2458811148|ref|XR_008468410.1| 75485 g22085 i0 100 0.786516853932584 28 0 16 0 73 100 599 572 PREDICTED: Rissa tridactyla LAS1 like ribosome biogenesis factor (LAS1L), transcript variant X2, misc_RNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Laridae Rissa Rissa tridactyla
4810369 4810369 PRJEB10320_P_NODE_14264_length_244_cov_1.866029_g14006_i0 PRJEB10320 14264 244 1.866029 4.55311076 Metazoa 33208 Chordata Chordata 113 9.95e-21   NTclustered gi|1953416889|ref|XM_038677876.1| 9615 g14006 i0 95.714 28.7172131147541 70 3 29 0 1 70 1442 1511 PREDICTED: Canis lupus familiaris tubulin beta 4B class IVb (TUBB4B), transcript variant X1, mRNA blastn 7007 113 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
5115865 5115865 PRJEB10320_P_NODE_10505_length_300_cov_2.350943_g10247_i0 PRJEB10320 10505 300 2.350943 7.052829 Corapipo altera 415028 Chordata Chordata 470 6.5e-128   NTclustered gi|1552673758|ref|XM_027633662.1| 415028 g10247 i0 95.27 2751.84666666667 296 14 99 0 1 296 723 1018 PREDICTED: Corapipo altera histone-lysine N-methyltransferase SETMAR-like (LOC113942555), mRNA blastn 825554 470 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Pipridae Corapipo Corapipo altera
5115924 5115924 PRJEB10320_P_NODE_23245_length_173_cov_1.094203_g22987_i0 PRJEB10320 23245 173 1.094203 1.89297119 Rhinatrema bivittatum 194408 Chordata Chordata 54.7 0.004   NTclustered gi|1694490494|ref|XM_029575478.1| 194408 g22987 i0 96.97 0.358381502890173 33 0 19 1 1 33 851 820 PREDICTED: Rhinatrema bivittatum gliomedin (GLDN), mRNA blastn 62 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Gymnophiona Rhinatrematidae Rhinatrema Rhinatrema bivittatum
5115931 5115931 PRJEB10320_P_NODE_24505_length_166_cov_1.832061_g24247_i0 PRJEB10320 24505 166 1.832061 3.04122126 Lampetra planeri 7750 Chordata Chordata 54.7 0.004   NTclustered gi|2805741416|emb|OZ078490.1| 7750 g24247 i0 100 0.174698795180723 29 0 17 0 101 129 5358415 5358443 Lampetra planeri genome assembly, chromosome: 5 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra planeri
5115935 5115935 PRJEB10320_P_NODE_25785_length_160_cov_1.600000_g25527_i0 PRJEB10320 25785 160 1.6 2.56 Branchiostoma belcheri 7741 Chordata Chordata 158 2.73e-34   NTclustered gi|18071661|gb|AY066029.1| 155462 g25527 i0 84.81 91.0375 158 22 98 2 3 159 206 362 Branchiostoma belcheri tsingtaunese ubiquitin/ribosomal protein S27a fusion protein (Ubf80) mRNA, complete cds blastn 14566 158 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
7665759 7665759 PRJEB10320_P_NODE_1827_length_786_cov_20.888149_g1653_i0 PRJEB10320 1827 786 20.888149 164.18085114 Canis lupus 9612 Chordata Chordata 63.9 3.64e-5   NTclustered gi|1952754328|ref|XM_038463722.1| 9615 g1653 i0 93.023 1.03944020356234 43 3 5 0 121 163 738 780 PREDICTED: Canis lupus familiaris glutamate rich 1 (ERICH1), transcript variant X1, mRNA blastn 817 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
8940505 8940505 PRJEB10320_P_NODE_22548_length_176_cov_3.120567_g22290_i0 PRJEB10320 22548 176 3.120567 5.49219792 Branchiostoma floridae 7739 Chordata Chordata 75 3.17e-9   NTclustered gi|1890006372|ref|XM_035806506.1| 7739 g22290 i0 87.879 30.2159090909091 66 5 36 1 114 176 1518 1453 PREDICTED: Branchiostoma floridae uncharacterized LOC118406454 (LOC118406454), mRNA blastn 5318 75 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
8940524 8940524 PRJEB10320_P_NODE_26568_length_157_cov_1.639344_g26310_i0 PRJEB10320 26568 157 1.639344 2.57377008 Moschus berezovskii 68408 Chordata Chordata 106 9.8e-19   NTclustered gi|2492361773|ref|XM_055397180.1| 68408 g26310 i0 80.882 18.9044585987261 136 24 86 2 23 157 1413 1279 PREDICTED: Moschus berezovskii dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit (DDOST), mRNA blastn 2968 106 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
12767090 12767090 PRJEB10320_P_NODE_24891_length_164_cov_2.713178_g24633_i0 PRJEB10320 24891 164 2.713178 4.44961192 Apteryx mantelli 2696672 Chordata Chordata 52.8 0.014   NTclustered gi|840009052|emb|LK064643.1| 202946 g24633 i0 100 0.170731707317073 28 0 17 0 24 51 297094 297067 Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold74 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Apterygiformes Apterygidae Apteryx Apteryx mantelli
12767093 12767093 PRJEB10320_P_NODE_25111_length_163_cov_1.875000_g24853_i0 PRJEB10320 25111 163 1.875 3.05625 Myxine glutinosa 7769 Chordata Chordata 115 1.7100000000000003e-21   NTclustered gi|2797531508|ref|XM_068097610.1| 7769 g24853 i0 81.429 24.5398773006135 140 26 86 0 5 144 872 733 PREDICTED: Myxine glutinosa serine/threonine-protein phosphatase PP1-beta catalytic subunit-like (LOC137412346), transcript variant X2, mRNA blastn 4000 115 1 Eukaryota Opisthokonta Metazoa Chordata Myxini Myxiniformes Myxinidae Myxine Myxine glutinosa
12767098 12767098 PRJEB10320_P_NODE_27171_length_155_cov_1.325000_g26913_i0 PRJEB10320 27171 155 1.325 2.05375 Loxodonta africana 9785 Chordata Chordata 54.7 0.004   NTclustered gi|2710959655|ref|XR_010321073.1| 9785 g26913 i0 100 0.187096774193548 29 0 19 0 66 94 1477 1449 PREDICTED: Loxodonta africana uncharacterized LOC135230397 (LOC135230397), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Proboscidea Elephantidae Loxodonta Loxodonta africana
15010304 15010304 PRJEB10320_P_NODE_18072_length_207_cov_1.162791_g17814_i0 PRJEB10320 18072 207 1.162791 2.40697737 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.018   NTclustered gi|2038330455|ref|XM_041578659.1| 8355 g17814 i0 100 13.5265700483092 28 0 14 0 107 134 2437 2464 PREDICTED: Xenopus laevis bromodomain adjacent to zinc finger domain 2B S homeolog (baz2b.S), transcript variant X8, mRNA blastn 2800 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
15010324 15010324 PRJEB10320_P_NODE_6992_length_389_cov_8.110169_g6737_i0 PRJEB10320 6992 389 8.110169 31.54855741 Petromyzontidae 7746 Chordata Chordata 82.4 4.74e-11   NTclustered gi|2635835673|ref|XR_009755418.1| 7753 g6737 i0 88.235 1.87660668380463 68 8 17 0 18 85 123 190 PREDICTED: Lethenteron reissneri uncharacterized LOC133345182 (LOC133345182), ncRNA blastn 730 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lethenteron Lethenteron reissneri
15315759 15315759 PRJEB10320_P_NODE_21193_length_185_cov_1.053333_g20935_i0 PRJEB10320 21193 185 1.053333 1.94866605 Hemicordylus capensis 884348 Chordata Chordata 58.4 3.4e-4   NTclustered gi|2432986356|ref|XM_053297152.1| 884348 g20935 i0 100 0.335135135135135 31 0 17 0 144 174 210 180 PREDICTED: Hemicordylus capensis zinc finger CCCH-type containing 10 (ZC3H10), transcript variant X2, mRNA blastn 62 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Cordylidae Hemicordylus Hemicordylus capensis
15315775 15315775 PRJEB10320_P_NODE_25693_length_161_cov_0.928571_g25435_i0 PRJEB10320 25693 161 0.928571 1.49499931 Anolis sagrei 38937 Chordata Chordata 58.4 2.87e-4   NTclustered gi|2789664187|ref|XM_067471534.1| 38937 g25435 i0 100 0.192546583850932 31 0 19 0 52 82 53 83 PREDICTED: Anolis sagrei NHS like 2 (NHSL2), transcript variant X1, mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Dactyloidae Anolis Anolis sagrei
16285058 16285058 PRJEB10320_P_NODE_15613_length_229_cov_1.561856_g15355_i0 PRJEB10320 15613 229 1.561856 3.57665024 Peromyscus 10040 Chordata Chordata 60.2 1.22e-4   NTclustered gi|1929267532|ref|XM_037197692.1| 10041 g15355 i0 90.909 5.80786026200873 44 4 19 0 95 138 1352 1309 PREDICTED: Peromyscus leucopus Ran GTPase activating protein 1 (Rangap1), mRNA blastn 1330 60.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Peromyscus Peromyscus leucopus
16285064 16285064 PRJEB10320_P_NODE_18253_length_205_cov_2.347059_g17995_i0 PRJEB10320 18253 205 2.347059 4.81147095 Aves 8782 Chordata Chordata 54.7 0.005   NTclustered gi|2718567391|ref|XM_064501551.1| 8790 g17995 i0 100 12.780487804878 29 0 14 0 177 205 707 679 PREDICTED: Dromaius novaehollandiae procathepsin L (LOC135324719), transcript variant X1, mRNA blastn 2620 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Casuariiformes Dromaiidae Dromaius Dromaius novaehollandiae
16285082 16285082 PRJEB10320_P_NODE_26973_length_156_cov_0.991736_g26715_i0 PRJEB10320 26973 156 0.991736 1.54710816 Metazoa 33208 Chordata Chordata 56.5 0.001   NTclustered gi|2917674706|emb|OZ228778.1| 160760 g26715 i0 100 0.384615384615385 30 0 19 0 31 60 2853704 2853733 Spinus spinus genome assembly, chromosome: 29 blastn 60 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Spinus Spinus spinus
17560344 17560344 PRJEB10320_P_NODE_25414_length_162_cov_1.251969_g25156_i0 PRJEB10320 25414 162 1.251969 2.02818978 Mammalia 40674 Chordata Chordata 113 6.1e-21   NTclustered gi|2080404623|ref|XM_042957166.1| 9694 g25156 i0 80 13.283950617284 155 29 95 2 6 159 475 322 PREDICTED: Panthera tigris eukaryotic translation initiation factor 1B (EIF1B), mRNA blastn 2152 113 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Panthera Panthera tigris
18834260 18834260 PRJEB10320_P_NODE_28195_length_151_cov_2.068966_g27937_i0 PRJEB10320 28195 151 2.068966 3.12413866 Metazoa 33208 Chordata Chordata 122 9.26e-24   NTclustered gi|2065636265|ref|XM_042339612.1| 7868 g27937 i0 85 1.52317880794702 120 18 79 0 1 120 745 626 PREDICTED: Callorhinchus milii SEC61 translocon subunit alpha 1 (LOC103176668), mRNA blastn 230 122 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Chimaeriformes Callorhinchidae Callorhinchus Callorhinchus milii
19138996 19138996 PRJEB10320_P_NODE_12216_length_271_cov_3.826271_g11958_i0 PRJEB10320 12216 271 3.826271 10.36919441 Empidonax traillii 164674 Chordata Chordata 211 3.87e-50   NTclustered gi|1561842549|ref|XM_027910259.1| 164674 g11958 i0 83.19 70.3173431734317 232 37 85 2 28 258 144 374 PREDICTED: Empidonax traillii 40S ribosomal protein S27 (LOC114072355), mRNA blastn 19056 211 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Tyrannidae Empidonax Empidonax traillii
22965439 22965439 PRJEB10320_P_NODE_4459_length_506_cov_3.450106_g4222_i0 PRJEB10320 4459 506 3.450106 17.45753636 Stegostoma tigrinum 3053191 Chordata Chordata 305 3.44e-78   NTclustered gi|2579327666|ref|XM_048520411.2| 3053191 g4222 i0 79.186 37.5770750988142 442 90 87 2 61 501 130 570 PREDICTED: Stegostoma tigrinum ribosomal protein S18 (rps18), mRNA blastn 19014 305 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Orectolobiformes Stegostomatidae Stegostoma Stegostoma tigrinum
24239460 24239460 PRJEB10320_P_NODE_23020_length_174_cov_1.294964_g22762_i0 PRJEB10320 23020 174 1.294964 2.25323736 Mus musculus 10090 Chordata Chordata 52.8 0.015   NTclustered gi|52077914|gb|AC145744.3| 10090 g22762 i0 100 0.32183908045977 28 0 16 0 80 107 198507 198534 Mus musculus BAC clone RP24-142P6 from 16, complete sequence blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;