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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB10320 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13550 13550 PRJEB10320_P_NODE_28261_length_151_cov_1.448276_g28003_i0 PRJEB10320 28261 151 1.448276 2.18689676 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 148 1.5299999999999999e-31   NTclustered gi|1027960071|ref|XM_735127.2| 31271 g28003 i0 86.131 70.9801324503311 137 19 91 0 3 139 1112 976 Plasmodium chabaudi chabaudi actin I, putative (PCHAS_1461600), partial mRNA blastn 10718 148 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
13551 13551 PRJEB10320_P_NODE_28541_length_150_cov_1.600000_g28283_i0 PRJEB10320 28541 150 1.6 2.4 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.3e-5   NTclustered gi|1145257018|ref|XM_012906115.2| 5854 g28283 i0 94.737 0.446666666666667 38 2 25 0 13 50 5677 5714 Plasmodium reichenowi trafficking protein particle complex subunit 8, putative partial mRNA blastn 67 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
982431 982431 PRJEB10320_P_NODE_23921_length_169_cov_1.305970_g23663_i0 PRJEB10320 23921 169 1.30597 2.2070893 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.34e-5   NTclustered gi|916501459|ref|XM_013496090.1| 44415 g23663 i0 100 5.80473372781065 33 0 20 0 120 152 146 178 Eimeria mitis uncharacterized protein (EMH_0045670), partial mRNA blastn 981 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
1287775 1287775 PRJEB10320_P_NODE_14522_length_241_cov_1.553398_g14264_i0 PRJEB10320 14522 241 1.553398 3.74368918 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|401407051|ref|XM_003882926.1| 572307 g14264 i0 96.97 10.8755186721992 33 1 14 0 135 167 428 396 Neospora caninum Liverpool conserved hypothetical protein (NCLIV_027320), partial mRNA blastn 2621 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
3839755 3839755 PRJEB10320_P_NODE_5384_length_455_cov_9.404762_g5135_i0 PRJEB10320 5384 455 9.404762 42.7916671 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|457871854|ref|XM_004222799.1| 1120755 g5135 i0 90.476 0.232967032967033 42 4 9 0 375 416 699 658 Plasmodium cynomolgi strain B transcription factor with AP2 domain(s) (PCYB_102500) mRNA, complete cds blastn 106 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
10216298 10216298 PRJEB10320_P_NODE_20369_length_190_cov_1.548387_g20111_i0 PRJEB10320 20369 190 1.548387 2.9419353 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.71e-5   NTclustered gi|1085116469|ref|XM_018779636.1| 508771 g20111 i0 90 9.51578947368421 50 2 25 3 107 153 5910 5861 Toxoplasma gondii ME49 Dopey, N-terminal domain-containing protein mRNA blastn 1808 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20414173 20414173 PRJEB10320_P_NODE_27077_length_155_cov_1.666667_g26819_i0 PRJEB10320 27077 155 1.666667 2.58333385 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.62e-5   NTclustered gi|1620114166|ref|XM_028670251.1| 5849 g26819 i0 97.222 2.66451612903226 36 0 23 1 68 103 3155 3121 Plasmodium gallinaceum conserved protein, unknown function (PGAL8A_00390500), partial mRNA blastn 413 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
21690172 21690172 PRJEB10320_P_NODE_24818_length_165_cov_1.230769_g24560_i0 PRJEB10320 24818 165 1.230769 2.03076885 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 121 3.73e-23   NTclustered gi|1270522599|ref|XM_721458.2| 5861 g24560 i0 91.011 19.2242424242424 89 8 54 0 75 163 1712 1624 Plasmodium yoelii uncharacterized protein (PY17X_1242900), partial mRNA blastn 3172 121 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;