RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10320 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13502 13502 PRJEB10320_P_NODE_14521_length_241_cov_1.553398_g14263_i0 PRJEB10320 14521 241 1.553398 3.74368918 Helobdella robusta 6412 Annelida Annelida 58.4 4.66e-4   NTclustered gi|675884653|ref|XM_009029581.1| 6412 g14263 i0 92.5 0.282157676348548 40 3 17 0 5 44 1381 1420 Helobdella robusta hypothetical protein mRNA blastn 68 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
15315771 15315771 PRJEB10320_P_NODE_25313_length_162_cov_2.000000_g25055_i0 PRJEB10320 25313 162 2 3.24 Ailoscolex lacteospumosus 1046305 Annelida Annelida 63.9 6.23e-6   NTclustered gi|2920003484|emb|OZ238865.1| 1046305 g25055 i0 93.023 0.549382716049383 43 3 27 0 100 142 5279770 5279728 Ailoscolex lacteospumosus genome assembly, chromosome: 6 blastn 89 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
20414141 20414141 PRJEB10320_P_NODE_18577_length_203_cov_1.160714_g18319_i0 PRJEB10320 18577 203 1.160714 2.35624942 Hirudo verbana 311461 Annelida Annelida 60.2 1.06e-4   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g18319 i0 97.143 0.172413793103448 35 1 17 0 96 130 13396366 13396400 Hirudo verbana genome assembly, chromosome: 4 blastn 35 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;