RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJEB10320 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11491513 11491513 PRJEB10320_P_NODE_18850_length_201_cov_1.108434_g18592_i0 PRJEB10320 18850 201 1.108434 2.22795234 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 372 1.18e-98   NTclustered gi|1519305892|dbj|AP019128.1| 10376 g18592 i0 100 100 201 0 100 0 1 201 152368 152168 Human gammaherpesvirus 4 UPN326_PBMC DNA, nearly complete genome blastn 20100 372 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
14041626 14041626 PRJEB10320_P_NODE_22472_length_177_cov_1.387324_g22214_i0 PRJEB10320 22472 177 1.387324 2.45556348 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 2.48e-5   NTclustered gi|2054495546|tpg|BK032237.1| 2832643 g22214 i0 97.222 0.604519774011299 36 1 20 0 4 39 6980 7015 MAG TPA_asm: Caudoviricetes sp. isolate ct3v52, partial genome blastn 107 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15315777 15315777 PRJEB10320_P_NODE_26413_length_158_cov_1.130081_g26155_i0 PRJEB10320 26413 158 1.130081 1.78552798 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 292 7.07e-75   NTclustered gi|1862917033|emb|LR812981.1| 10376 g26155 i0 100 100.867088607595 158 0 100 0 1 158 78440 78283 Human gammaherpesvirus 4 isolate HC-0002 genome assembly, chromosome: EBV blastn 15937 292 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
21690177 21690177 PRJEB10320_P_NODE_27258_length_155_cov_0.950000_g27000_i0 PRJEB10320 27258 155 0.95 1.4725 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 287 3.21e-73   NTclustered gi|1540305393|gb|MH590479.1| 10376 g27000 i0 100 100 155 0 100 0 1 155 156768 156614 Human gammaherpesvirus 4 isolate HKHD110, partial genome blastn 15500 287 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;