RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB10320 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6391664 6391664 PRJEB10320_P_NODE_18466_length_204_cov_1.278107_g18208_i0 PRJEB10320 18466 204 1.278107 2.60733828 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.018   NTclustered gi|2794937855|ref|XM_067876238.1| 2049356 g18208 i0 100 0.137254901960784 28 0 14 0 113 140 6351 6324 Monocercomonoides exilis putative dual specificity phosphatase, catalytic domain containing protein (MONOS_6038), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
11491506 11491506 PRJEB10320_P_NODE_16550_length_220_cov_1.400000_g16292_i0 PRJEB10320 16550 220 1.4 3.08 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.019   NTclustered gi|123487023|ref|XM_001324812.1| 412133 g16292 i0 100 0.254545454545455 28 0 13 0 132 159 66 39 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0146900), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
14041644 14041644 PRJEB10320_P_NODE_25992_length_159_cov_2.274194_g25734_i0 PRJEB10320 25992 159 2.274194 3.61596846 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 56.5 0.001   NTclustered gi|2806455912|ref|XM_068502517.1| 1144522 g25734 i0 100 0.188679245283019 30 0 19 0 84 113 2760 2789 Tritrichomonas foetus uncharacterized protein (TRFO_22357), partial mRNA blastn 30 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23934879 23934879 PRJEB10320_P_NODE_10579_length_299_cov_1.700758_g10321_i0 PRJEB10320 10579 299 1.700758 5.08526642 Monocercomonoides 302781 Preaxostyla other_Eukaryota 318 2.48e-82   NTclustered gi|156708131|gb|EF474123.1| 302782 g10321 i0 87.189 92.2374581939799 281 34 94 2 1 280 967 1246 Monocercomonoides sp. PA clone 4/4 tubulin alpha subunit mRNA, complete cds blastn 27579 318 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;