contig_metadata
6 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5115864 | 5115864 | PRJEB10320_P_NODE_10385_length_302_cov_9.505618_g10127_i0 | PRJEB10320 | 10385 | 302 | 9.505618 | 28.70696636 | Synechococcus sp. CB0101 | 232348 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1626690261|gb|CP039373.1| | 232348 | g10127 | i0 | 100 | 0.0927152317880795 | 28 | 0 | 9 | 0 | 54 | 81 | 1687073 | 1687046 | Synechococcus sp. CB0101 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. CB0101 | |
| 6085580 | 6085580 | PRJEB10320_P_NODE_12205_length_272_cov_1.172996_g11947_i0 | PRJEB10320 | 12205 | 272 | 1.172996 | 3.19054912 | Cyanobacterium | 102234 | Bacteria | Bacteria | 196 | 1.09e-45 | NTclustered | gi|2645834647|gb|CP141254.1| | 3088144 | g11947 | i0 | 81.702 | 84.8455882352941 | 235 | 43 | 86 | 0 | 1 | 235 | 867685 | 867451 | Cyanobacterium aponinum UTEX 3221 chromosome, complete genome | blastn | 23078 | 196 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Geminocystaceae | Cyanobacterium | Cyanobacterium aponinum | |
| 16590432 | 16590432 | PRJEB10320_P_NODE_28534_length_150_cov_1.695652_g28276_i0 | PRJEB10320 | 28534 | 150 | 1.695652 | 2.543478 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 272 | 8.609999999999998e-69 | NTclustered | gi|225696182|gb|FJ805849.1| | 259957 | g28276 | i0 | 99.333 | 157.033333333333 | 150 | 1 | 100 | 0 | 1 | 150 | 2291 | 2142 | Uncultured Chroococcidiopsis sp. clone AU1_8 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 23555 | 272 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 19139002 | 19139002 | PRJEB10320_P_NODE_14556_length_240_cov_3.702439_g14298_i0 | PRJEB10320 | 14556 | 240 | 3.702439 | 8.8858536 | Leptolyngbya sp. 7M | 2812896 | Bacteria | Bacteria | 355 | 1.47e-93 | NTclustered | gi|2028908486|gb|CP070897.1| | 2812896 | g14298 | i0 | 93.361 | 324.366666666667 | 241 | 14 | 100 | 2 | 1 | 240 | 4626688 | 4626927 | Leptolyngbya sp. 7M chromosome | blastn | 77848 | 355 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbya | Leptolyngbya sp. 7M | |
| 20108966 | 20108966 | PRJEB10320_P_NODE_16736_length_218_cov_2.371585_g16478_i0 | PRJEB10320 | 16736 | 218 | 2.371585 | 5.1700553 | root | 1 | Root_unresolved | Root_unresolved | 403 | 4.62e-108 | NTclustered | gi|151351748|gb|EF664457.1| | 1211 | g16478 | i0 | 100 | 99.9678899082569 | 218 | 0 | 100 | 0 | 1 | 218 | 665 | 448 | Uncultured cyanobacterium clone GASP-MB1S1_G12 16S ribosomal RNA gene, partial sequence | blastn | 21793 | 403 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 21690194 | 21690194 | PRJEB10320_P_NODE_598_length_1252_cov_8.731306_g500_i0 | PRJEB10320 | 598 | 1252 | 8.731306 | 109.31595112 | Stanieria cyanosphaera | 102116 | Bacteria | Bacteria | 640 | 2.15e-178 | NTclustered | gi|17976754|emb|AJ252121.1| | 111780 | g500 | i0 | 79.865 | 14.5503194888179 | 889 | 168 | 70 | 10 | 221 | 1102 | 885 | 1 | Dermocarpa sp. strain PCC 7437 partial gap gene for NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) | blastn | 18217 | 640 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pleurocapsales | Dermocarpellaceae | Stanieria | Stanieria cyanosphaera |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;