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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJEB10320" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 14 ✖

bioproject 1

  • PRJEB10320 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5115885 5115885 PRJEB10320_P_NODE_16245_length_223_cov_1.063830_g15987_i0 PRJEB10320 16245 223 1.06383 2.3723409 Heterostelium album 2086695 Evosea other_Eukaryota 180 8.7e-41   NTclustered gi|1160556604|ref|XM_020574127.1| 670386 g15987 i0 81.25 99.7309417040359 224 40 100 2 1 223 1127 1349 Polysphondylium pallidum PN500 ATP synthase beta chain (atp5b), partial mRNA blastn 22240 180 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
5115887 5115887 PRJEB10320_P_NODE_16585_length_220_cov_1.021622_g16327_i0 PRJEB10320 16585 220 1.021622 2.2475684 Dictyostelium purpureum 5786 Evosea other_Eukaryota 172 1.43e-38   NTclustered gi|330842002|ref|XM_003292928.1| 5786 g16327 i0 89.63 8.60454545454546 135 14 61 0 11 145 155 21 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_95723), partial mRNA blastn 1893 172 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
6085598 6085598 PRJEB10320_P_NODE_26945_length_156_cov_0.991736_g26687_i0 PRJEB10320 26945 156 0.991736 1.54710816 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.9 3.52e-13   NTclustered gi|511085357|dbj|AK419921.1| 5759 g26687 i0 87.013 35.974358974359 77 10 49 0 4 80 95 19 Entamoeba histolytica cDNA clone: Xeh-006I22, strain: HM-1:IMSS blastn 5612 87.9 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
6391693 6391693 PRJEB10320_P_NODE_24586_length_166_cov_1.221374_g24328_i0 PRJEB10320 24586 166 1.221374 2.02748084 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.001   NTclustered gi|66805304|ref|XM_631293.1| 352472 g24328 i0 100 0.355421686746988 30 0 18 0 35 64 136 165 Dictyostelium discoideum AX4 hypothetical protein (litaf) mRNA, complete cds blastn 59 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6391695 6391695 PRJEB10320_P_NODE_25726_length_160_cov_2.248000_g25468_i0 PRJEB10320 25726 160 2.248 3.5968 Cochliopodium arabianum 1676989 Discosea other_Eukaryota 291 2.5799999999999998e-74   NTclustered gi|861685103|gb|KP244685.1| 1676989 g25468 i0 99.375 79.14375 160 1 100 0 1 160 660 819 Cochliopodium arabianum voucher YT360_361 18S ribosomal RNA gene, partial sequence blastn 12663 291 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium arabianum
7360160 7360160 PRJEB10320_P_NODE_406_length_1438_cov_13.662153_g317_i0 PRJEB10320 406 1438 13.662153 196.46176014 Acanthamoeba 5754 Discosea other_Eukaryota 270 3.74e-67   NTclustered gi|28194618|gb|AF479562.1| 29195 g317 i0 72.653 23.4297635605007 980 208 66 45 146 1088 1389 433 Acanthamoeba griffini strain S7 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 33692 270 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba griffini
8940521 8940521 PRJEB10320_P_NODE_25728_length_160_cov_2.240000_g25470_i0 PRJEB10320 25728 160 2.24 3.584 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 291 2.5799999999999998e-74   NTclustered gi|330902855|gb|JF298253.1| 1017091 g25470 i0 99.375 11.3125 160 1 100 0 1 160 13 172 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 1810 291 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
14041601 14041601 PRJEB10320_P_NODE_16792_length_218_cov_1.486339_g16534_i0 PRJEB10320 16792 218 1.486339 3.24021902 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.019   NTclustered gi|111226891|ref|XM_639539.2| 352472 g16534 i0 100 0.256880733944954 28 0 13 0 173 200 2073 2100 Dictyostelium discoideum AX4 adaptor-related protein complex 2, alpha subunit (ap2a1-2) mRNA, complete cds blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
17865314 17865314 PRJEB10320_P_NODE_23535_length_171_cov_1.470588_g23277_i0 PRJEB10320 23535 171 1.470588 2.51470548 Dictyostelium purpureum 5786 Evosea other_Eukaryota 84.2 5.08e-12   NTclustered gi|330843959|ref|XM_003293860.1| 5786 g23277 i0 83.333 3.22222222222222 90 15 53 0 5 94 323 234 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93127), mRNA blastn 551 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17865320 17865320 PRJEB10320_P_NODE_25035_length_164_cov_1.062016_g24777_i0 PRJEB10320 25035 164 1.062016 1.74170624 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 281 1.6000000000000001e-71   NTclustered gi|659103845|gb|KJ569729.1| 1512276 g24777 i0 97.561 54.9085365853659 164 4 100 0 1 164 399 562 Cochliopodium kieliense isolate 2 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 9005 281 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
19138985 19138985 PRJEB10320_P_NODE_10196_length_306_cov_1.645756_g9938_i0 PRJEB10320 10196 306 1.645756 5.03601336 Heterostelium album 2086695 Evosea other_Eukaryota 95.3 4.68e-15   NTclustered gi|1160553732|ref|XM_020572691.1| 670386 g9938 i0 89.333 14.3169934640523 75 8 25 0 1 75 1228 1302 Polysphondylium pallidum PN500 elongation factor 1 alpha (efaAI), partial mRNA blastn 4381 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
20414194 20414194 PRJEB10320_P_NODE_7937_length_360_cov_2.073846_g7680_i0 PRJEB10320 7937 360 2.073846 7.4658456 Heterostelium album 2086695 Evosea other_Eukaryota 211 5.32e-50   NTclustered gi|1160570380|ref|XM_020574684.1| 670386 g7680 i0 78.354 0.911111111111111 328 69 91 2 13 339 151 477 Polysphondylium pallidum PN500 vacuolar ATPase proteolipid subunit (vatP), partial mRNA blastn 328 211 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
21384604 21384604 PRJEB10320_P_NODE_27457_length_154_cov_1.201681_g27199_i0 PRJEB10320 27457 154 1.201681 1.85058874 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 119 1.23e-22   NTclustered gi|66826094|ref|XM_641310.1| 352472 g27199 i0 83.465 45.5974025974026 127 21 82 0 28 154 1423 1549 Dictyostelium discoideum AX4 ATP synthase beta chain, mitochondrial (atp5b) mRNA, complete cds blastn 7022 119 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
21690200 21690200 PRJEB10320_P_NODE_7638_length_368_cov_2.834835_g7382_i0 PRJEB10320 7638 368 2.834835 10.4321928 Cochliopodium arabianum 1676989 Discosea other_Eukaryota 580 3.609999999999999e-161   NTclustered gi|861685103|gb|KP244685.1| 1676989 g7382 i0 95.664 36.7635869565217 369 2 100 6 1 368 497 142 Cochliopodium arabianum voucher YT360_361 18S ribosomal RNA gene, partial sequence blastn 13529 580 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium arabianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;