RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7663917 7663917 PRJEB10140_P_NODE_14187_length_1856_cov_31.005534_g8011_i0 PRJEB10140 14187 1856 31.005534 575.46271104 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 80.5 8.78e-10   NTclustered gi|2701364224|ref|XM_063867501.1| 84072 g8011 i0 83.516 0.378771551724138 91 10 6 4 1159 1246 825 737 PREDICTED: Symsagittifera roscoffensis mucin-2-like (LOC134851425), mRNA blastn 703 80.5 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
20108895 20108895 PRJEB10140_P_NODE_39516_length_901_cov_3.117371_g25435_i0 PRJEB10140 39516 901 3.117371 28.08751271 Metazoa 33208 Xenacoelomorpha other_Eukaryota 75 1.94e-8   NTclustered gi|1354562544|gb|KY709783.1| 84115 g25435 i0 83.333 1.20754716981132 84 11 9 3 802 885 336 256 Meara stichopi NK2.1 homeobox protein mRNA, partial cds blastn 1088 75 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Nemertodermatida Nemertodermatidae Meara Meara stichopi
21688386 21688386 PRJEB10140_P_NODE_16678_length_1690_cov_10.270567_g8011_i1 PRJEB10140 16678 1690 10.270567 173.5725823 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 80.5 7.98e-10   NTclustered gi|2701364224|ref|XM_063867501.1| 84072 g8011 i1 83.516 0.415976331360947 91 10 6 4 993 1080 825 737 PREDICTED: Symsagittifera roscoffensis mucin-2-like (LOC134851425), mRNA blastn 703 80.5 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;