RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5115691 5115691 PRJEB10140_P_NODE_72905_length_503_cov_7.222467_g55742_i0 PRJEB10140 72905 503 7.222467 36.32900901 Acidiplasma sp. 1872114 Archaea Archaea 52.8 0.049   NTclustered gi|2573969472|gb|CP133599.1| 1872114 g55742 i0 100 0.0556660039761431 28 0 6 0 411 438 625798 625825 MAG: Acidiplasma sp. isolate BR_02 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Acidiplasma Acidiplasma sp.
6391412 6391412 PRJEB10140_P_NODE_59186_length_619_cov_3.000000_g42539_i0 PRJEB10140 59186 619 3 18.57 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 54.7 0.017   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g42539 i0 100 0.0936995153473344 29 0 5 0 79 107 1261363 1261391 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 58 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
10214239 10214239 PRJEB10140_P_NODE_115869_length_315_cov_2.533835_g98563_i0 PRJEB10140 115869 315 2.533835 7.98158025 Picrophilus oshimae 46632 Archaea Archaea 54.7 0.008   NTclustered gi|48429720|gb|AE017261.1| 1122961 g98563 i0 100 0.0920634920634921 29 0 9 0 267 295 836273 836245 Picrophilus torridus DSM 9790, complete genome blastn 29 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Picrophilaceae Picrophilus Picrophilus oshimae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;