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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10140 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11669 11669 PRJEB10140_P_NODE_14321_length_1846_cov_36.215359_g8094_i0 PRJEB10140 14321 1846 36.215359 668.53552714 Lingula anatina 7574 Brachiopoda other_Eukaryota 869 0   NTclustered gi|919021581|ref|XM_013539184.1| 7574 g8094 i0 80.136 51.9241603466956 1178 222 63 11 141 1312 79 1250 PREDICTED: Lingula anatina 26S proteasome regulatory subunit 8 (LOC106162073), mRNA blastn 95852 869 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
13082 13082 PRJEB10140_P_NODE_32041_length_1073_cov_5.690430_g19771_i0 PRJEB10140 32041 1073 5.69043 61.0583139 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 6.52e-4   NTclustered gi|919085167|ref|XM_013524312.1| 7574 g19771 i0 97.143 0.130475302889096 35 1 3 0 206 240 2309 2343 PREDICTED: Lingula anatina apoptosis-inducing factor 3 (LOC106151200), transcript variant X2, mRNA blastn 140 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
1285789 1285789 PRJEB10140_P_NODE_116962_length_312_cov_5.422053_g99656_i0 PRJEB10140 116962 312 5.422053 16.91680536 Terebratalia transversa 34513 Brachiopoda other_Eukaryota 58.4 6.27e-4   NTclustered gi|1042705950|gb|KX372776.1| 34513 g99656 i0 97.059 0.108974358974359 34 1 11 0 229 262 282804 282771 Terebratalia transversa posterior 2 homeobox protein-like gene, partial sequence; Lox4 homeobox protein gene, complete cds; antennapedia homeobox protein-like gene, partial sequence; and Lox5 homeobox protein, sex combs reduced homeobox protein, deformed homeobox protein, and Hox3 homeobox protein genes, complete cds blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Rhynchonellata Terebratulida Laqueidae Terebratalia Terebratalia transversa
1287483 1287483 PRJEB10140_P_NODE_5742_length_2920_cov_7.496691_g3189_i0 PRJEB10140 5742 2920 7.496691 218.9033772 Lingula anatina 7574 Brachiopoda other_Eukaryota 62.1 5.04e-4   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g3189 i0 94.872 0.0133561643835616 39 2 1 0 1215 1253 335 373 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 39 62.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
2563141 2563141 PRJEB10140_P_NODE_6123_length_2836_cov_172.495874_g3379_i1 PRJEB10140 6123 2836 172.495874 4891.98298664 Lingula anatina 7574 Brachiopoda other_Eukaryota 420 7.009999999999999e-112   NTclustered gi|919013214|ref|XM_013535648.1| 7574 g3379 i1 83.519 15.6435119887165 449 74 16 0 2388 2836 667 219 PREDICTED: Lingula anatina ADP-ribosylation factor 1 (LOC106159377), transcript variant X2, mRNA blastn 44365 420 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
6390348 6390348 PRJEB10140_P_NODE_220226_length_182_cov_2.368421_g202917_i0 PRJEB10140 220226 182 2.368421 4.31052622 Lingula anatina 7574 Brachiopoda other_Eukaryota 78.7 2.55e-10   NTclustered gi|1351492162|ref|XR_002886227.1| 7574 g202917 i0 85.714 2.53846153846154 77 8 41 2 58 131 123 47 PREDICTED: Lingula anatina small nucleolar RNA SNORA73 family (LOC112041406), ncRNA blastn 462 78.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
6391595 6391595 PRJEB10140_P_NODE_92326_length_396_cov_23.319885_g75033_i0 PRJEB10140 92326 396 23.319885 92.3467446 Lingula anatina 7574 Brachiopoda other_Eukaryota 65.8 4.87e-6   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g75033 i0 95.122 0.103535353535354 41 2 10 0 264 304 373 333 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 41 65.8 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
8938625 8938625 PRJEB10140_P_NODE_14488_length_1834_cov_27.411204_g8192_i0 PRJEB10140 14488 1834 27.411204 502.72148136 Lingula anatina 7574 Brachiopoda other_Eukaryota 327 2.8099999999999998e-84   NTclustered gi|919010570|ref|XM_013534272.1| 7574 g8192 i0 79.825 1.45038167938931 456 86 25 4 1262 1714 580 128 PREDICTED: Lingula anatina ubiquitin-conjugating enzyme E2 G1 (LOC106158342), mRNA blastn 2660 327 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
8940219 8940219 PRJEB10140_P_NODE_56908_length_644_cov_16.440336_g40437_i0 PRJEB10140 56908 644 16.440336 105.87576384 Lingula anatina 7574 Brachiopoda other_Eukaryota 65.8 8.22e-6   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g40437 i0 95.122 0.108695652173913 41 2 11 0 512 552 373 333 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 70 65.8 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
8940369 8940369 PRJEB10140_P_NODE_8488_length_2455_cov_35.182876_g4676_i0 PRJEB10140 8488 2455 35.182876 863.7396058 Lingula anatina 7574 Brachiopoda other_Eukaryota 815 0   NTclustered gi|1351338627|ref|XM_013536949.2| 7574 g4676 i0 77.208 2.07454175152749 1404 314 57 6 115 1515 126 1526 PREDICTED: Lingula anatina growth arrest-specific protein 8 (LOC106160367), mRNA blastn 5093 815 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
10215029 10215029 PRJEB10140_P_NODE_23349_length_1362_cov_30.680122_g13754_i0 PRJEB10140 23349 1362 30.680122 417.86326164 Lingula anatina 7574 Brachiopoda other_Eukaryota 62.1 2.32e-4   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g13754 i0 94.872 0.052863436123348 39 2 3 0 1259 1297 373 335 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 72 62.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
11489730 11489730 PRJEB10140_P_NODE_156690_length_238_cov_1.798942_g139382_i0 PRJEB10140 156690 238 1.798942 4.28148196 Lingula anatina 7574 Brachiopoda other_Eukaryota 80.5 9.81e-11   NTclustered gi|919031051|ref|XM_013543707.1| 7574 g139382 i0 94.231 2.9327731092437 52 3 22 0 28 79 761 812 PREDICTED: Lingula anatina homeobox protein Hox-D3 (LOC106165494), transcript variant X2, mRNA blastn 698 80.5 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
12766624 12766624 PRJEB10140_P_NODE_296971_length_153_cov_3.096154_g279662_i0 PRJEB10140 296971 153 3.096154 4.73711562 Lingula anatina 7574 Brachiopoda other_Eukaryota 132 1.5600000000000002e-26   NTclustered gi|919084230|ref|XM_013523951.1| 7574 g279662 i0 82.667 10.4117647058824 150 24 97 2 3 151 4649 4797 PREDICTED: Lingula anatina small G protein signaling modulator 1 (LOC106150923), mRNA blastn 1593 132 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
15313700 15313700 PRJEB10140_P_NODE_1173_length_5474_cov_90.498802_g644_i0 PRJEB10140 1173 5474 90.498802 4953.90442148 Lingula anatina 7574 Brachiopoda other_Eukaryota 496 2.1999999999999992e-134   NTclustered gi|1351467854|ref|XM_013551987.2| 7574 g644 i0 71.31 7.94556083302886 2290 556 41 81 712 2943 3543 5789 PREDICTED: Lingula anatina rootletin-like (LOC106171578), transcript variant X7, mRNA blastn 43494 496 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
15314324 15314324 PRJEB10140_P_NODE_217373_length_184_cov_1.503704_g200064_i0 PRJEB10140 217373 184 1.503704 2.76681536 Lingula anatina 7574 Brachiopoda other_Eukaryota 56.5 0.001   NTclustered gi|919085761|ref|XM_013524557.1| 7574 g200064 i0 96.97 0.809782608695652 33 1 18 0 112 144 46 78 PREDICTED: Lingula anatina uncharacterized LOC106151338 (LOC106151338), transcript variant X1, mRNA blastn 149 56.5 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16588390 16588390 PRJEB10140_P_NODE_1174_length_5474_cov_88.425622_g644_i1 PRJEB10140 1174 5474 88.425622 4840.41854828 Lingula anatina 7574 Brachiopoda other_Eukaryota 494 7.909999999999998e-134   NTclustered gi|1351467854|ref|XM_013551987.2| 7574 g644 i1 71.267 7.9941541834125 2304 561 41 81 2532 4777 5789 3529 PREDICTED: Lingula anatina rootletin-like (LOC106171578), transcript variant X7, mRNA blastn 43760 494 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16588638 16588638 PRJEB10140_P_NODE_159174_length_235_cov_1.489247_g141866_i0 PRJEB10140 159174 235 1.489247 3.49973045 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 1.26e-4   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g141866 i0 94.737 0.161702127659574 38 2 16 0 51 88 370 333 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 38 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16590050 16590050 PRJEB10140_P_NODE_46854_length_773_cov_25.919890_g31496_i0 PRJEB10140 46854 773 25.91989 200.3607497 Lingula anatina 7574 Brachiopoda other_Eukaryota 363 3.1499999999999995e-95   NTclustered gi|919090858|ref|XM_013527016.1| 7574 g31496 i0 78.431 24.1888745148771 561 117 72 3 131 689 46 604 PREDICTED: Lingula anatina AP-3 complex subunit sigma-1 (LOC106153181), transcript variant X2, mRNA blastn 18698 363 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16590088 16590088 PRJEB10140_P_NODE_51914_length_703_cov_51.532110_g35946_i0 PRJEB10140 51914 703 51.53211 362.2707333 Lingula anatina 7574 Brachiopoda other_Eukaryota 163 3.11e-35   NTclustered gi|919100591|ref|XR_001237675.1| 7574 g35946 i0 82.723 3.92318634423898 191 26 27 6 23 211 45 230 PREDICTED: Lingula anatina uncharacterized LOC106156112 (LOC106156112), ncRNA blastn 2758 163 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16590144 16590144 PRJEB10140_P_NODE_6074_length_2848_cov_172.778135_g3379_i0 PRJEB10140 6074 2848 172.778135 4920.7212848 Lingula anatina 7574 Brachiopoda other_Eukaryota 420 7.039999999999998e-112   NTclustered gi|919013214|ref|XM_013535648.1| 7574 g3379 i0 83.519 15.5775983146067 449 74 16 0 2400 2848 667 219 PREDICTED: Lingula anatina ADP-ribosylation factor 1 (LOC106159377), transcript variant X2, mRNA blastn 44365 420 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
19136960 19136960 PRJEB10140_P_NODE_111356_length_328_cov_1.437276_g94051_i0 PRJEB10140 111356 328 1.437276 4.71426528 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 1.84e-4   NTclustered gi|1351353751|ref|XM_013561418.2| 7574 g94051 i0 100 0.182926829268293 32 0 10 0 82 113 367 336 PREDICTED: Lingula anatina annexin B11-like (LOC106178295), mRNA blastn 60 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
19137190 19137190 PRJEB10140_P_NODE_15336_length_1777_cov_85.385417_g2680_i4 PRJEB10140 15336 1777 85.385417 1517.29886009 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 0.001   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g2680 i4 92.857 0.0236353404614519 42 2 2 1 176 216 333 374 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
19138977 19138977 PRJEB10140_P_NODE_9856_length_2277_cov_71.173698_g2680_i2 PRJEB10140 9856 2277 71.173698 1620.62510346 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 0.001   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g2680 i2 92.857 0.0184453227931489 42 2 2 1 2062 2102 374 333 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
20412879 20412879 PRJEB10140_P_NODE_22997_length_1376_cov_31.721176_g13523_i0 PRJEB10140 22997 1376 31.721176 436.48338176 Lingula anatina 7574 Brachiopoda other_Eukaryota 62.1 2.34e-4   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g13523 i0 94.872 0.0523255813953488 39 2 3 0 66 104 335 373 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 72 62.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
21688535 21688535 PRJEB10140_P_NODE_188638_length_204_cov_2.458065_g171329_i0 PRJEB10140 188638 204 2.458065 5.0144526 Lingula anatina 7574 Brachiopoda other_Eukaryota 183 6.05e-42   NTclustered gi|919063679|ref|XM_013558005.1| 7574 g171329 i0 82.843 55.6421568627451 204 35 100 0 1 204 392 189 PREDICTED: Lingula anatina 60S ribosomal protein L30 (LOC106175849), transcript variant X1, mRNA blastn 11351 183 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
21690063 21690063 PRJEB10140_P_NODE_8818_length_2411_cov_68.600762_g2680_i1 PRJEB10140 8818 2411 68.600762 1653.96437182 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 0.001   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g2680 i1 92.857 0.0174201576109498 42 2 2 1 176 216 333 374 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
22965058 22965058 PRJEB10140_P_NODE_4839_length_3141_cov_41.880983_g2680_i0 PRJEB10140 4839 3141 41.880983 1315.48167603 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 0.002   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g2680 i0 92.857 0.0133715377268386 42 2 1 1 2926 2966 374 333 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
24237495 24237495 PRJEB10140_P_NODE_13180_length_1940_cov_82.819672_g2680_i3 PRJEB10140 13180 1940 82.819672 1606.7016368 Lingula anatina 7574 Brachiopoda other_Eukaryota 60.2 0.001   NTclustered gi|919022958|ref|XM_013539925.1| 7574 g2680 i3 92.857 0.0216494845360825 42 2 2 1 176 216 333 374 PREDICTED: Lingula anatina ribulose-phosphate 3-epimerase (LOC106162600), transcript variant X1, mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
24239024 24239024 PRJEB10140_P_NODE_360_length_9076_cov_16.565636_g194_i0 PRJEB10140 360 9076 16.565636 1503.49712336 Lingula anatina 7574 Brachiopoda other_Eukaryota 730 0   NTclustered gi|1351426362|ref|XM_024076513.1| 7574 g194 i0 77.445 12.8048699867783 1237 270 14 7 5354 6586 7270 6039 PREDICTED: Lingula anatina ankyrin repeat domain-containing protein 17 (LOC106168224), mRNA blastn 116217 730 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;