RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 7 ✖

bioproject 1

  • PRJEB10140 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13252 13252 PRJEB10140_P_NODE_58261_length_629_cov_7.518966_g41685_i0 PRJEB10140 58261 629 7.518966 47.29429614 Saccharolobus caldissimus 1702097 Archaea Archaea 54.7 0.017   NTclustered gi|2129441369|dbj|AP025226.1| 1702097 g41685 i0 100 0.0461049284578696 29 0 5 0 175 203 866123 866095 Saccharolobus caldissimus JCM32116 DNA, complete genome blastn 29 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus caldissimus
8635331 8635331 PRJEB10140_P_NODE_243827_length_169_cov_1.733333_g226518_i0 PRJEB10140 243827 169 1.733333 2.92933277 Candidatus Nitrosomarinus 1993653 Archaea Archaea 54.7 0.004   NTclustered gi|1196088602|gb|CP021324.1| 1898749 g226518 i0 100 0.343195266272189 29 0 17 0 36 64 1351901 1351873 Candidatus Nitrosomarinus catalina strain SPOT01 chromosome, complete genome blastn 58 54.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Candidatus Nitrosomarinus Candidatus Nitrosomarinus catalinensis
11489924 11489924 PRJEB10140_P_NODE_192710_length_201_cov_1.368421_g175401_i0 PRJEB10140 192710 201 1.368421 2.75052621 Acidianus ambivalens 2283 Archaea Archaea 62.1 2.9e-5   NTclustered gi|1780181985|gb|CP045482.1| 2283 g175401 i0 93.182 0.766169154228856 44 0 20 2 81 121 2242076 2242033 Acidianus ambivalens strain LEI 10 chromosome, complete genome blastn 154 62.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus ambivalens
16588581 16588581 PRJEB10140_P_NODE_149974_length_247_cov_2.020202_g132666_i0 PRJEB10140 149974 247 2.020202 4.98989894 Candidatus Nitrosomarinus catalinensis 1898749 Archaea Archaea 52.8 0.022   NTclustered gi|1196088602|gb|CP021324.1| 1898749 g132666 i0 100 0.11336032388664 28 0 11 0 192 219 1213542 1213515 Candidatus Nitrosomarinus catalina strain SPOT01 chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Candidatus Nitrosomarinus Candidatus Nitrosomarinus catalinensis
19136979 19136979 PRJEB10140_P_NODE_114316_length_319_cov_3.100000_g97010_i0 PRJEB10140 114316 319 3.1 9.889 Thermoproteus uzoniensis 184117 Archaea Archaea 52.8 0.03   NTclustered gi|326946401|gb|CP002590.1| 999630 g97010 i0 100 0.0877742946708464 28 0 9 0 4 31 1601335 1601308 Thermoproteus uzoniensis 768-20, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus uzoniensis
20413483 20413483 PRJEB10140_P_NODE_277517_length_164_cov_0.904348_g260208_i0 PRJEB10140 277517 164 0.904348 1.48313072 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.014   NTclustered gi|323706731|gb|CP002529.1| 985053 g260208 i0 100 0.170731707317073 28 0 17 0 67 94 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
22659265 22659265 PRJEB10140_P_NODE_256198_length_167_cov_0.881356_g238889_i0 PRJEB10140 256198 167 0.881356 1.47186452 Sulfurisphaera 69655 Archaea Archaea 62.1 2.33e-5   NTclustered gi|1780177153|gb|CP045484.1| 69656 g238889 i0 92.857 0.826347305389222 42 3 25 0 112 153 1204563 1204522 Sulfurisphaera ohwakuensis strain TA-1 chromosome, complete genome blastn 138 62.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfurisphaera Sulfurisphaera ohwakuensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;