RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJEB10140 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1286017 1286017 PRJEB10140_P_NODE_154642_length_241_cov_1.276042_g137334_i0 PRJEB10140 154642 241 1.276042 3.07526122 Promethearchaeota archaeon 2053489 Archaea Archaea 54.7 0.006   NTclustered gi|2107931243|gb|CP070805.1| 2053489 g137334 i0 96.97 0.136929460580913 33 0 13 1 190 221 2013948 2013980 MAG: Promethearchaeota archaeon isolate bin132 chromosome blastn 33 54.7 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
5114243 5114243 PRJEB10140_P_NODE_180545_length_212_cov_1.239264_g163236_i0 PRJEB10140 180545 212 1.239264 2.62723968 Promethearchaeum syntrophicum 2594042 Archaea Archaea 52.8 0.019   NTclustered gi|2778339399|gb|CP042905.2| 2594042 g163236 i0 100 0.132075471698113 28 0 13 0 111 138 1452339 1452366 Promethearchaeum syntrophicum strain MK-D1 chromosome, complete genome blastn 28 52.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Promethearchaeum Promethearchaeum syntrophicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;