RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJEB10140 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8940359 8940359 PRJEB10140_P_NODE_82928_length_441_cov_7.612245_g65667_i0 PRJEB10140 82928 441 7.612245 33.57000045 Candidatus Methanoperedenaceae archaeon GB37 2691037 Archaea Archaea 56.5 0.003   NTclustered gi|1964039634|emb|LR991653.1| 2691037 g65667 i0 96.97 0.0748299319727891 33 1 7 0 75 107 1721911 1721879 Candidatus Methanoperedenaceae archaeon GB37 isolate gfbio:2ba61e4a-a911-483b-ba5e-e0ad8afd3b38:GoM-Arc1_E37 genome assembly, chromosome: 1 blastn 33 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae   Candidatus Methanoperedenaceae archaeon GB37
19137319 19137319 PRJEB10140_P_NODE_174276_length_218_cov_1.739645_g156967_i0 PRJEB10140 174276 218 1.739645 3.7924261 Methanocorpusculum labreanum 83984 Archaea Archaea 52.8 0.019   NTclustered gi|124362370|gb|CP000559.1| 410358 g156967 i0 100 0.128440366972477 28 0 13 0 159 186 1026969 1026942 Methanocorpusculum labreanum Z, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;