RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB10140 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6389770 6389770 PRJEB10140_P_NODE_131006_length_280_cov_2.103896_g113699_i0 PRJEB10140 131006 280 2.103896 5.8909088 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.026   NTclustered gi|2794932433|ref|XM_067863462.1| 2049356 g113699 i0 100 0.1 28 0 10 0 124 151 3314 3341 Monocercomonoides exilis uncharacterized protein (MONOS_10972), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
24237599 24237599 PRJEB10140_P_NODE_149320_length_248_cov_1.798995_g132012_i0 PRJEB10140 149320 248 1.798995 4.4615076 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 4.82e-4   NTclustered gi|2794960145|ref|XM_067865170.1| 2049356 g132012 i0 97.059 11.3991935483871 34 1 14 0 140 173 1681 1714 Monocercomonoides exilis uncharacterized protein (MONOS_12541), partial mRNA blastn 2827 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;