RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB10140" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 9 ✖

bioproject 1

  • PRJEB10140 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3839564 3839564 PRJEB10140_P_NODE_81724_length_448_cov_3.491228_g64465_i0 PRJEB10140 81724 448 3.491228 15.64070144 Entamoeba dispar 46681 Evosea other_Eukaryota 52.8 0.043   NTclustered gi|167387888|ref|XM_001738297.1| 370354 g64465 i0 100 0.0625 28 0 6 0 76 103 1274 1301 Entamoeba dispar SAW760 tyrosine protein kinase transforming protein SEA, putative (EDI_165220), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
5113912 5113912 PRJEB10140_P_NODE_127205_length_288_cov_1.736402_g109898_i0 PRJEB10140 127205 288 1.736402 5.00083776 Dictyostelium purpureum 5786 Evosea other_Eukaryota 95.3 4.36e-15   NTclustered gi|330840413|ref|XM_003292163.1| 5786 g109898 i0 88.462 0.270833333333333 78 9 27 0 159 236 624 701 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_57790), partial mRNA blastn 78 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5114586 5114586 PRJEB10140_P_NODE_228385_length_178_cov_1.193798_g211076_i0 PRJEB10140 228385 178 1.193798 2.12496044 Dictyostelium discoideum 44689 Evosea other_Eukaryota 158 3.1e-34   NTclustered gi|66818077|ref|XM_637640.1| 352472 g211076 i0 86.207 13.3089887640449 145 20 81 0 13 157 373 517 Dictyostelium discoideum AX4 NADH-ubiquinone oxidoreductase 23 kDa subunit (ndufs8) mRNA, complete cds blastn 2369 158 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7663747 7663747 PRJEB10140_P_NODE_109727_length_332_cov_5.544170_g92422_i0 PRJEB10140 109727 332 5.54417 18.4066444 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52.8 0.031   NTclustered gi|470247520|ref|XM_004366586.1| 261658 g92422 i0 96.774 0.0933734939759036 31 1 9 0 196 226 136 166 Cavenderia fasciculata uncharacterized protein (DFA_02253), partial mRNA blastn 31 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
7663870 7663870 PRJEB10140_P_NODE_13327_length_1928_cov_2.593933_g7491_i0 PRJEB10140 13327 1928 2.593933 50.01102824 Cavenderia fasciculata 261658 Evosea other_Eukaryota 60.2 0.001   NTclustered gi|470248599|ref|XM_004357786.1| 261658 g7491 i0 100 0.016597510373444 32 0 2 0 630 661 95 64 Cavenderia fasciculata uncharacterized protein (DFA_00127), partial mRNA blastn 32 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
11491419 11491419 PRJEB10140_P_NODE_91130_length_401_cov_24.732955_g73841_i0 PRJEB10140 91130 401 24.732955 99.17914955 Entamoeba dispar 46681 Evosea other_Eukaryota 54.7 0.011   NTclustered gi|167379274|ref|XM_001735021.1| 370354 g73841 i0 100 0.0723192019950125 29 0 7 0 219 247 520 548 Entamoeba dispar SAW760 guanyl-nucleotide exchange factor, putative (EDI_342160), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
19138363 19138363 PRJEB10140_P_NODE_279616_length_163_cov_1.824561_g262307_i0 PRJEB10140 279616 163 1.824561 2.97403443 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|1160559416|ref|XM_020577812.1| 670386 g262307 i0 96.97 0.54601226993865 33 0 20 1 2 33 1349 1381 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 89 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
22963440 22963440 PRJEB10140_P_NODE_127679_length_287_cov_1.756303_g110372_i0 PRJEB10140 127679 287 1.756303 5.04058961 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.007   NTclustered gi|1160559574|ref|XM_020577891.1| 670386 g110372 i0 94.286 0.121951219512195 35 2 12 0 143 177 1897 1863 Polysphondylium pallidum PN500 putative WRKY transcription factor (wrky1), partial mRNA blastn 35 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24237324 24237324 PRJEB10140_P_NODE_105220_length_347_cov_2.506711_g87921_i0 PRJEB10140 105220 347 2.506711 8.69828717 Entamoeba dispar 46681 Evosea other_Eukaryota 52.8 0.033   NTclustered gi|167388790|ref|XM_001738646.1| 370354 g87921 i0 100 0.0806916426512968 28 0 8 0 212 239 332 305 Entamoeba dispar SAW760 uncharacterized protein (EDI_275430), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;