RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2560650 2560650 PRJDB9741_P_NODE_10863_length_200_cov_1.900662_g10546_i0 PRJDB9741 10863 200 1.900662 3.801324 Linderina pennispora 61395 Fungi Fungi 76.8 1.03e-9   NTclustered gi|2028324380|ref|XM_040885147.1| 61395 g10546 i0 87.879 9.575 66 6 33 2 117 181 713 649 Linderina pennispora ribosomal protein S24, isoform CRA_j (DL89DRAFT_248548), partial mRNA blastn 1915 76.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22962825 22962825 PRJDB9741_P_NODE_31059_length_165_cov_1.732759_g30742_i0 PRJDB9741 31059 165 1.732759 2.85905235 Neoconidiobolus pachyzygosporus 2316162 Fungi Fungi 139 1.03e-28   NTclustered gi|1813056688|ref|NG_067786.1| 2316162 g30742 i0 83.133 45.6606060606061 166 14 100 2 1 165 844 692 Neoconidiobolus pachyzygosporus HMAS 247948 28S rRNA gene, partial sequence; from TYPE material blastn 7534 139 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus pachyzygosporus
24236713 24236713 PRJDB9741_P_NODE_15220_length_186_cov_1.547445_g14903_i0 PRJDB9741 15220 186 1.547445 2.8782477 Linderina pennispora 61395 Fungi Fungi 89.8 1.21e-13   NTclustered gi|2028313130|ref|XM_040891190.1| 61395 g14903 i0 82.243 1.33333333333333 107 15 56 4 20 124 708 604 Linderina pennispora uncharacterized protein (DL89DRAFT_320180), partial mRNA blastn 248 89.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;