RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2560677 2560677 PRJDB9741_P_NODE_1403_length_687_cov_9.526646_g1120_i0 PRJDB9741 1403 687 9.526646 65.44805802 Brachionus rubens 392764 Rotifera other_Eukaryota 396 2.75e-105   NTclustered gi|1802791198|gb|MN256531.1| 392764 g1120 i0 78.931 28.8034934497817 636 94 91 33 55 677 11790 11182 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 19788 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
3532542 3532542 PRJDB9741_P_NODE_5203_length_277_cov_7.482456_g4887_i0 PRJDB9741 5203 277 7.482456 20.72640312 Metazoa 33208 Rotifera other_Eukaryota 505 1.63e-138   NTclustered gi|72153731|gb|DQ089739.1| 104782 g4887 i0 99.638 55.9097472924188 276 1 99 0 2 277 1475 1200 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 15487 510 0.990196078431373 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
5113276 5113276 PRJDB9741_P_NODE_24385_length_171_cov_1.516393_g24068_i0 PRJDB9741 24385 171 1.516393 2.59303203 Adineta vaga 104782 Rotifera other_Eukaryota 268 1.31e-67   NTclustered gi|259129963|gb|GQ398061.1| 104782 g24068 i0 96.319 2.7719298245614 163 6 95 0 1 163 10236 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 474 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14039124 14039124 PRJDB9741_P_NODE_5212_length_277_cov_2.210526_g4896_i0 PRJDB9741 5212 277 2.210526 6.12315702 Adineta vaga 104782 Rotifera other_Eukaryota 507 4.53e-139   NTclustered gi|72153731|gb|DQ089739.1| 104782 g4896 i0 99.639 68.0938628158845 277 1 100 0 1 277 1949 2225 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 18862 507 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
18833632 18833632 PRJDB9741_P_NODE_35395_length_163_cov_1.350877_g35078_i0 PRJDB9741 35395 163 1.350877 2.20192951 Metazoa 33208 Rotifera other_Eukaryota 294 2.04e-75   NTclustered gi|37785582|gb|AY210469.1| 96448 g35078 i0 99.383 93.638036809816 162 1 99 0 2 163 1406 1245 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 15263 294 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
20411684 20411684 PRJDB9741_P_NODE_5177_length_278_cov_3.873362_g4861_i0 PRJDB9741 5177 278 3.873362 10.76794636 Philodina roseola 96448 Rotifera other_Eukaryota 501 2.11e-137   NTclustered gi|37785582|gb|AY210469.1| 96448 g4861 i0 99.278 83.3669064748201 277 2 99 0 2 278 3150 2874 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 23176 501 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
22962948 22962948 PRJDB9741_P_NODE_6759_length_241_cov_2.838542_g6442_i0 PRJDB9741 6759 241 2.838542 6.84088622 Philodina citrina 468664 Rotifera other_Eukaryota 298 2.52e-76   NTclustered gi|407227484|emb|FR856884.1| 468664 g6442 i0 89.3 81.0165975103734 243 19 100 6 1 241 2154 1917 Philodina citrina complete mitochondrial genome blastn 19525 298 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
25207904 25207904 PRJDB9741_P_NODE_1780_length_580_cov_5.163842_g1479_i0 PRJDB9741 1780 580 5.163842 29.9502836 Eurotatoria 2816136 Rotifera other_Eukaryota 944 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g1479 i0 96.041 43.7724137931034 581 22 100 1 1 580 1513 2093 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 25388 950 0.993684210526316 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;