RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
981799 981799 PRJDB9741_P_NODE_26641_length_168_cov_1.285714_g26324_i0 PRJDB9741 26641 168 1.285714 2.15999952 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.2 8.43e-5   NTclustered gi|2224869|gb|U53001.1|DLU53001 27895 g26324 i0 100 19.3690476190476 32 0 19 0 100 131 80 111 Dendrocoelum lacteum ribosomal RNA large subunit gene, partial sequence blastn 3254 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dendrocoelidae Dendrocoelum Dendrocoelum lacteum
15313242 15313242 PRJDB9741_P_NODE_4933_length_287_cov_2.063025_g4617_i0 PRJDB9741 4933 287 2.063025 5.92088175 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 385 2.2999999999999995e-102   NTclustered gi|68479954|gb|DQ076149.1| 6182 g4617 i0 90.909 0.996515679442509 286 26 99 0 2 287 424 139 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 286 385 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;