RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11099 11099 PRJDB9741_P_NODE_7441_length_230_cov_1.685083_g7124_i0 PRJDB9741 7441 230 1.685083 3.8756909 Heterostelium album 2086695 Evosea other_Eukaryota 130 9.22e-26   NTclustered gi|1160556590|ref|XM_020574120.1| 670386 g7124 i0 83.099 17.295652173913 142 24 62 0 76 217 427 286 Polysphondylium pallidum PN500 S-adenosylmethionine synthetase (metK), partial mRNA blastn 3978 130 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
10213862 10213862 PRJDB9741_P_NODE_869_length_939_cov_4.967416_g658_i0 PRJDB9741 869 939 4.967416 46.64403624 Cavenderia fasciculata 261658 Evosea other_Eukaryota 527 1.2899999999999994e-144   NTclustered gi|470260760|ref|XM_004360149.1| 261658 g658 i0 76.857 63.9563365282215 929 201 98 8 1 923 921 1 Cavenderia fasciculata elongation factor 1 alpha (efaAI), partial mRNA blastn 60055 527 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
12764546 12764546 PRJDB9741_P_NODE_36211_length_163_cov_0.894737_g35894_i0 PRJDB9741 36211 163 0.894737 1.45842131 Acytostelium subglobosum 361139 Evosea other_Eukaryota 93.5 8.01e-15   NTclustered gi|831786008|ref|XM_012902515.1| 1410327 g35894 i0 77.358 4.91411042944785 159 34 97 2 4 161 464 621 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 801 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;