contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10831 | 10831 | PRJDB9741_P_NODE_13741_length_189_cov_1.285714_g13424_i0 | PRJDB9741 | 13741 | 189 | 1.285714 | 2.42999946 | Campylobacter showae | 204 | Bacteria | Bacteria | 344 | 2.39e-90 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g13424 | i0 | 99.471 | 10.968253968254 | 189 | 1 | 100 | 0 | 1 | 189 | 1113146 | 1112958 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 2073 | 344 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 6389296 | 6389296 | PRJDB9741_P_NODE_7326_length_231_cov_3.346154_g7009_i0 | PRJDB9741 | 7326 | 231 | 3.346154 | 7.72961574 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g7009 | i0 | 100 | 140.926406926407 | 231 | 0 | 100 | 0 | 1 | 231 | 335287 | 335517 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 32554 | 427 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 9909927 | 9909927 | PRJDB9741_P_NODE_10028_length_208_cov_1.283019_g9711_i0 | PRJDB9741 | 10028 | 208 | 1.283019 | 2.66867952 | Campylobacter | 194 | Bacteria | Bacteria | 385 | 1.58e-102 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g9711 | i0 | 100 | 224.932692307692 | 208 | 0 | 100 | 0 | 1 | 208 | 1579 | 1786 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 46786 | 385 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 10213855 | 10213855 | PRJDB9741_P_NODE_7989_length_222_cov_3.872832_g7672_i0 | PRJDB9741 | 7989 | 222 | 3.872832 | 8.59768704 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 411 | 2.8199999999999996e-110 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g7672 | i0 | 100 | 194.936936936937 | 222 | 0 | 100 | 0 | 1 | 222 | 335165 | 334944 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 43276 | 411 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 13735315 | 13735315 | PRJDB9741_P_NODE_34691_length_163_cov_3.245614_g34374_i0 | PRJDB9741 | 34691 | 163 | 3.2456140000000002 | 5.29035082 | Campylobacterales | 213849 | Bacteria | Bacteria | 268 | 1.24e-67 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g34374 | i0 | 96.319 | 239.006134969325 | 163 | 6 | 100 | 0 | 1 | 163 | 43417 | 43255 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 38958 | 268 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 15313116 | 15313116 | PRJDB9741_P_NODE_2773_length_428_cov_3.039578_g2458_i0 | PRJDB9741 | 2773 | 428 | 3.039578 | 13.00939384 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|34482172|emb|BX571657.1| | 844 | g2458 | i0 | 99.533 | 176.016355140187 | 428 | 2 | 100 | 0 | 1 | 428 | 140087 | 139660 | Wolinella succinogenes, complete genome; segment 1/7 | blastn | 75335 | 780 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 15313273 | 15313273 | PRJDB9741_P_NODE_7073_length_236_cov_1.165775_g6756_i0 | PRJDB9741 | 7073 | 236 | 1.165775 | 2.751229 | uncultured Arcobacter sp. | 165434 | Bacteria | Bacteria | 178 | 3.35e-40 | NTclustered | gi|682122801|gb|KJ739652.1| | 165434 | g6756 | i0 | 90.58 | 84.2542372881356 | 138 | 8 | 58 | 4 | 101 | 236 | 6 | 140 | Uncultured Arcobacter sp. clone ONWR3-May-27-2012 23S ribosomal RNA gene, partial sequence | blastn | 19884 | 178 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | uncultured Arcobacter sp. | ||
| 16587673 | 16587673 | PRJDB9741_P_NODE_10714_length_201_cov_3.138158_g10397_i0 | PRJDB9741 | 10714 | 201 | 3.138158 | 6.30769758 | Arcobacter roscoffensis | 2961520 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|2270258285|gb|CP100595.1| | 2961520 | g10397 | i0 | 100 | 359.89552238806 | 201 | 0 | 100 | 0 | 1 | 201 | 276320 | 276120 | Arcobacter roscoffensis strain ARW1-2F2 chromosome, complete genome | blastn | 72339 | 372 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter roscoffensis | ||
| 20411498 | 20411498 | PRJDB9741_P_NODE_19557_length_178_cov_4.837209_g19240_i0 | PRJDB9741 | 19557 | 178 | 4.837209 | 8.61023202 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 302 | 1.35e-77 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g19240 | i0 | 97.191 | 135.662921348315 | 178 | 5 | 100 | 0 | 1 | 178 | 334088 | 334265 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 24148 | 302 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 22962973 | 22962973 | PRJDB9741_P_NODE_959_length_881_cov_2.996394_g731_i0 | PRJDB9741 | 959 | 881 | 2.996394 | 26.39823114 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 1605 | 0 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g731 | i0 | 99.546 | 150 | 881 | 4 | 100 | 0 | 1 | 881 | 336374 | 335494 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 132150 | 1605 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;