RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJDB9741 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12764616 12764616 PRJDB9741_P_NODE_5531_length_268_cov_2.004566_g5215_i0 PRJDB9741 5531 268 2.004566 5.37223688 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 183 8.339999999999997e-42   NTclustered gi|833483999|ref|XM_012911664.1| 5866 g5215 i0 83.938 51.9440298507463 193 29 72 2 32 223 234 43 Babesia bigemina 60S ribosomal protein L44 protein, putative partial mRNA blastn 13921 183 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
15313232 15313232 PRJDB9741_P_NODE_4373_length_311_cov_1.122137_g4057_i0 PRJDB9741 4373 311 1.122137 3.48984607 Babesia major 127461 SAR_Eukaryotes SAR_Eukaryotes 143 1.6799999999999999e-29   NTclustered gi|363586012|gb|JN391438.1| 127461 g4057 i0 91.346 32.8553054662379 104 9 33 0 8 111 1202 1099 Babesia major isolate Yili 28S ribosomal RNA gene, partial sequence blastn 10218 143 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia major
18833578 18833578 PRJDB9741_P_NODE_22735_length_173_cov_2.274194_g22418_i0 PRJDB9741 22735 173 2.274194 3.93435562 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 320 3.61e-83   NTclustered gi|260232156|dbj|AK318155.1| 5811 g22418 i0 100 4.01734104046243 173 0 100 0 1 173 527 699 Toxoplasma gondii cDNA, clone: XTG05903.2, full cDNA, XTG Sugano cDNA library blastn 695 320 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20411647 20411647 PRJDB9741_P_NODE_38057_length_162_cov_0.902655_g37740_i0 PRJDB9741 38057 162 0.902655 1.4623011 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.73e-6   NTclustered gi|1673122061|ref|XM_029366880.1| 94643 g37740 i0 93.182 2.66049382716049 44 3 27 0 118 161 571 614 Besnoitia besnoiti nuclear factor NF3 (BESB_085300), partial mRNA blastn 431 65.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;