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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJDB9741" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 24 ✖

bioproject 1

  • PRJDB9741 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11099 11099 PRJDB9741_P_NODE_7441_length_230_cov_1.685083_g7124_i0 PRJDB9741 7441 230 1.685083 3.8756909 Heterostelium album 2086695 Evosea other_Eukaryota 130 9.22e-26   NTclustered gi|1160556590|ref|XM_020574120.1| 670386 g7124 i0 83.099 17.295652173913 142 24 62 0 76 217 427 286 Polysphondylium pallidum PN500 S-adenosylmethionine synthetase (metK), partial mRNA blastn 3978 130 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
1285214 1285214 PRJDB9741_P_NODE_26282_length_168_cov_1.815126_g25965_i0 PRJDB9741 26282 168 1.815126 3.04941168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 128 2.28e-25   NTclustered gi|1755631453|dbj|LC472811.1| 5755 g25965 i0 80.588 2.82142857142857 170 29 100 4 1 168 574 407 Acanthamoeba castellanii ATCC 30011 mRNA for cysteine proteinase 5 blastn 474 128 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2257137 2257137 PRJDB9741_P_NODE_4922_length_287_cov_5.508403_g4606_i0 PRJDB9741 4922 287 5.508403 15.80911661 Acanthamoeba 5754 Discosea other_Eukaryota 514 2.82e-141   NTclustered gi|507399|gb|U07403.1|ACU07403 5755 g4606 i0 98.955 100.135888501742 287 3 100 0 1 287 163 449 Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene blastn 28739 514 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2257165 2257165 PRJDB9741_P_NODE_7802_length_225_cov_1.306818_g7485_i0 PRJDB9741 7802 225 1.306818 2.9403405 Vannella 95228 Discosea other_Eukaryota 416 6.159999999999998e-112   NTclustered gi|62865934|gb|AY929909.1| 325075 g7485 i0 100 100.782222222222 225 0 100 0 1 225 1116 892 Vannella sp. strain 4362V/II 18S small subunit ribosomal RNA gene, partial sequence blastn 22676 416 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4362V/II
2560793 2560793 PRJDB9741_P_NODE_2983_length_407_cov_19.399441_g2668_i0 PRJDB9741 2983 407 19.399441 78.95572487 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 603 8.6e-168   NTclustered gi|300078498|gb|GU001160.1| 5755 g2668 i0 95.913 35.9238329238329 367 15 90 0 29 395 7831 7465 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14621 603 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3532512 3532512 PRJDB9741_P_NODE_3803_length_340_cov_17.250859_g3487_i0 PRJDB9741 3803 340 17.250859 58.6529206 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 627 4.199999999999999e-175   NTclustered gi|909719646|gb|KT185626.1| 5755 g3487 i0 100 52.8 339 0 99 0 2 340 3954 3616 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17952 627 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7359543 7359543 PRJDB9741_P_NODE_3806_length_340_cov_4.178694_g3490_i0 PRJDB9741 3806 340 4.178694 14.2075596 Vannellidae 95227 Discosea other_Eukaryota 516 9.48e-142   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3490 i0 93.948 101.085294117647 347 11 100 6 1 340 1655 1312 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 34369 520 0.992307692307692 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
7663221 7663221 PRJDB9741_P_NODE_24667_length_170_cov_3.256198_g24350_i0 PRJDB9741 24667 170 3.256198 5.5355366 Vannella simplex 197532 Discosea other_Eukaryota 315 1.64e-81   NTclustered gi|284192627|gb|GQ265425.1| 197532 g24350 i0 100 99.2235294117647 170 0 100 0 1 170 544 713 Vannella simplex strain Malagnou clone A171.5 18S ribosomal RNA gene, partial sequence blastn 16868 315 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
7663348 7663348 PRJDB9741_P_NODE_4347_length_311_cov_39.026718_g4031_i0 PRJDB9741 4347 311 39.026718 121.37309298 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 531 3.06e-146   NTclustered gi|300078498|gb|GU001160.1| 5755 g4031 i0 97.436 13.7331189710611 312 6 100 2 1 311 7066 6756 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4271 531 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8937849 8937849 PRJDB9741_P_NODE_22568_length_174_cov_1.224000_g22251_i0 PRJDB9741 22568 174 1.224 2.12976 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.09e-28   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g22251 i0 83.333 5.71264367816092 150 25 86 0 2 151 315 166 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 994 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10213829 10213829 PRJDB9741_P_NODE_6289_length_250_cov_7.626866_g5972_i0 PRJDB9741 6289 250 7.626866 19.067165 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 411 3.239999999999999e-110   NTclustered gi|300078498|gb|GU001160.1| 5755 g5972 i0 96.4 56.64 250 8 99 1 2 250 5358 5109 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14160 411 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10213862 10213862 PRJDB9741_P_NODE_869_length_939_cov_4.967416_g658_i0 PRJDB9741 869 939 4.967416 46.64403624 Cavenderia fasciculata 261658 Evosea other_Eukaryota 527 1.2899999999999994e-144   NTclustered gi|470260760|ref|XM_004360149.1| 261658 g658 i0 76.857 63.9563365282215 929 201 98 8 1 923 921 1 Cavenderia fasciculata elongation factor 1 alpha (efaAI), partial mRNA blastn 60055 527 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
11488835 11488835 PRJDB9741_P_NODE_2150_length_512_cov_6.300216_g1839_i0 PRJDB9741 2150 512 6.300216 32.25710592 Ripella sp. GP2 1217115 Discosea other_Eukaryota 891 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g1839 i0 98.051 96.91796875 513 9 100 1 1 512 524 12 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 49622 891 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
11488878 11488878 PRJDB9741_P_NODE_27150_length_167_cov_1.627119_g26833_i0 PRJDB9741 27150 167 1.627119 2.71728873 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 287 3.53e-73   NTclustered gi|470449065|ref|XM_004340181.1| 1257118 g26833 i0 98.182 1.64071856287425 165 2 98 1 1 164 231 395 Acanthamoeba castellanii str. Neff ribosomal protein L6e, putative (ACA1_369520), partial mRNA blastn 274 287 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12764546 12764546 PRJDB9741_P_NODE_36211_length_163_cov_0.894737_g35894_i0 PRJDB9741 36211 163 0.894737 1.45842131 Acytostelium subglobosum 361139 Evosea other_Eukaryota 93.5 8.01e-15   NTclustered gi|831786008|ref|XM_012902515.1| 1410327 g35894 i0 77.358 4.91411042944785 159 34 97 2 4 161 464 621 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 801 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
13735301 13735301 PRJDB9741_P_NODE_3171_length_387_cov_20.014793_g2856_i0 PRJDB9741 3171 387 20.014793 77.45724891 Acanthamoeba 5754 Discosea other_Eukaryota 494 5.11e-135   NTclustered gi|507399|gb|U07403.1|ACU07403 5755 g2856 i0 96.333 77.5607235142119 300 9 77 2 89 386 1776 2075 Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene blastn 30016 494 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14038888 14038888 PRJDB9741_P_NODE_1732_length_591_cov_37.614391_g1435_i0 PRJDB9741 1732 591 37.614391 222.30105081 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 913 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g1435 i0 95.502 17.1269035532995 578 14 97 8 21 591 5939 5367 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10122 913 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15313102 15313102 PRJDB9741_P_NODE_2633_length_447_cov_4.080402_g2319_i0 PRJDB9741 2633 447 4.080402 18.23939694 Ripella sp. GP2 1217115 Discosea other_Eukaryota 686 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g2319 i0 94.444 101.015659955257 450 18 100 7 1 447 1022 577 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 45154 686 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
16284520 16284520 PRJDB9741_P_NODE_4033_length_328_cov_1.670251_g3717_i0 PRJDB9741 4033 328 1.670251 5.47842328 Vermamoeba 1260114 Tubulinea other_Eukaryota 573 5.329999999999998e-159   NTclustered gi|909719645|gb|KT185625.1| 5778 g3717 i0 98.171 79.8140243902439 328 6 100 0 1 328 5227 4900 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 26179 573 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
16587940 16587940 PRJDB9741_P_NODE_6754_length_241_cov_3.276042_g6437_i0 PRJDB9741 6754 241 3.276042 7.89526122 Lobosea sp. Borok 297386 Tubulinea other_Eukaryota 425 1.11e-114   NTclustered gi|54306228|gb|AY626163.1| 297386 g6437 i0 98.34 89.2655601659751 241 4 100 0 1 241 364 124 Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence blastn 21513 425 1 Eukaryota Amoebozoa   Tubulinea         Lobosea sp. Borok
16587965 16587965 PRJDB9741_P_NODE_8614_length_215_cov_1.843373_g8297_i0 PRJDB9741 8614 215 1.843373 3.96325195 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 4.88e-58   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g8297 i0 86.512 42.6139534883721 215 29 100 0 1 215 254 40 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 9162 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18833608 18833608 PRJDB9741_P_NODE_2835_length_422_cov_29.423592_g2520_i0 PRJDB9741 2835 422 29.423592 124.16755824 Acanthamoeba 5754 Discosea other_Eukaryota 780 0   NTclustered gi|328751298|gb|JF437606.1| 5755 g2520 i0 100 100.296208530806 422 0 100 0 1 422 422 1 Acanthamoeba castellanii strain T17c3 18S ribosomal RNA gene, partial sequence blastn 42325 780 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18833689 18833689 PRJDB9741_P_NODE_6335_length_249_cov_26.675000_g6018_i0 PRJDB9741 6335 249 26.675 66.42075 Acanthamoeba 5754 Discosea other_Eukaryota 459 1.1399999999999998e-124   NTclustered gi|328751298|gb|JF437606.1| 5755 g6018 i0 100 99.5863453815261 248 0 99 0 2 249 1157 910 Acanthamoeba castellanii strain T17c3 18S ribosomal RNA gene, partial sequence blastn 24797 459 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24236890 24236890 PRJDB9741_P_NODE_38600_length_162_cov_0.902655_g38283_i0 PRJDB9741 38600 162 0.902655 1.4623011 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 265 1.5899999999999998e-66   NTclustered gi|470532140|ref|XM_004358242.1| 1257118 g38283 i0 96.273 0.993827160493827 161 6 99 0 1 161 1022 1182 Acanthamoeba castellanii str. Neff signal recognition particle 68 kDa protein (ACA1_018770), partial mRNA blastn 161 265 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;