RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJDB4941" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4941 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6388600 6388600 PRJDB4941_P_NODE_29686_length_183_cov_1.164179_g28918_i0 PRJDB4941 29686 183 1.164179 2.13044757 Pristina longiseta 188231 Annelida Annelida 252 1.43e-62   NTclustered gi|2169792353|gb|OM001222.1| 188231 g28918 i0 96.104 60.1639344262295 154 6 84 0 1 154 154 1 Pristina longiseta voucher CW649 large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 11010 252 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina longiseta
12763785 12763785 PRJDB4941_P_NODE_22351_length_214_cov_1.866667_g21583_i0 PRJDB4941 22351 214 1.866667 3.99466738 Macellicephala sp. 4 ASH-2024 3384954 Annelida Annelida 73.1 1.45e-8   NTclustered gi|2169932556|gb|OM008005.1| 3384954 g21583 i0 95.556 20.696261682243 45 2 21 0 1 45 45 1 Macellicephala sp. 4 ASH-2024 voucher SIO:BIC:A10099 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 4429 73.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Polynoidae Macellicephala Macellicephala sp. 4 ASH-2024
16587372 16587372 PRJDB4941_P_NODE_35654_length_167_cov_1.762712_g34886_i0 PRJDB4941 35654 167 1.762712 2.94372904 Mesenchytraeus solifugus 223748 Annelida Annelida 71.3 3.87e-8   NTclustered gi|1068289173|gb|KU728930.1| 223748 g34886 i0 95.455 1.75449101796407 44 2 26 0 124 167 148 105 Mesenchytraeus solifugus 16S large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 293 71.3 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Enchytraeida Enchytraeidae Mesenchytraeus Mesenchytraeus solifugus
19135674 19135674 PRJDB4941_P_NODE_17116_length_252_cov_1.458128_g16348_i0 PRJDB4941 17116 252 1.458128 3.67448256 Pristina longiseta 188231 Annelida Annelida 368 2e-97   NTclustered gi|2169792353|gb|OM001222.1| 188231 g16348 i0 98.558 80.0238095238095 208 3 83 0 45 252 527 320 Pristina longiseta voucher CW649 large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 20166 368 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina longiseta
24236104 24236104 PRJDB4941_P_NODE_21920_length_217_cov_1.119048_g21152_i0 PRJDB4941 21920 217 1.119048 2.42833416 Hirudo verbana 311461 Annelida Annelida 54.7 0.005   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g21152 i0 100 0.133640552995392 29 0 13 0 2 30 16479893 16479865 Hirudo verbana genome assembly, chromosome: 1 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;