RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB4941" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6388760 6388760 PRJDB4941_P_NODE_39246_length_164_cov_0.860870_g38478_i0 PRJDB4941 39246 164 0.86087 1.4118268 Methanobrevibacter millerae 230361 Archaea Archaea 106 1.04e-18   NTclustered gi|968564921|gb|CP011266.1| 230361 g38478 i0 79.085 13.9268292682927 153 32 93 0 5 157 652698 652850 Methanobrevibacter millerae strain SM9, complete genome blastn 2284 106 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
12763984 12763984 PRJDB4941_P_NODE_32571_length_173_cov_1.612903_g31803_i0 PRJDB4941 32571 173 1.612903 2.79032219 Halalkaliarchaeum sp. AArc-CO 2866381 Archaea Archaea 113 6.5700000000000005e-21   NTclustered gi|2295229904|gb|CP087723.1| 2866381 g31803 i0 81.379 18.1098265895954 145 21 82 3 1 142 1721305 1721446 Halalkaliarchaeum sp. AArc-CO chromosome, complete genome blastn 3133 113 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halalkaliarchaeum Halalkaliarchaeum sp. AArc-CO

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;