RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB4941" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15312750 15312750 PRJDB4941_P_NODE_41233_length_162_cov_0.920354_g40465_i0 PRJDB4941 41233 162 0.920354 1.49097348 Nostoc sp. MS1 2764711 Bacteria Bacteria 78.7 2.22e-10   NTclustered gi|2093825993|dbj|AP023441.1| 2764711 g40465 i0 86.301 0.648148148148148 73 8 44 2 76 147 704822 704751 Nostoc sp. MS1 DNA, complete genome blastn 105 78.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. MS1
20108209 20108209 PRJDB4941_P_NODE_38736_length_164_cov_0.904348_g37968_i0 PRJDB4941 38736 164 0.904348 1.48313072 Chroococcidiopsis 54298 Bacteria Bacteria 243 7.57e-60   NTclustered gi|428006994|gb|CP003597.1| 251229 g37968 i0 94.839 1.89024390243902 155 8 95 0 1 155 4490152 4489998 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 310 243 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;