RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJDB4470" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4470 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6387967 6387967 PRJDB4470_P_NODE_65726_length_232_cov_1.360656_g64571_i0 PRJDB4470 65726 232 1.360656 3.15672192 Rhizopus arrhizus 64495 Fungi Fungi 156 1.54e-33   NTclustered gi|58578599|ref|NC_006836.1| 64495 g64571 i0 92.593 59.3189655172414 108 8 47 0 67 174 519 412 Rhizopus oryzae mitochondrion, complete genome blastn 13762 156 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
6388026 6388026 PRJDB4470_P_NODE_73206_length_213_cov_1.542683_g72051_i0 PRJDB4470 73206 213 1.542683 3.28591479 Phycomyces blakesleeanus 4837 Fungi Fungi 52.8 0.019   NTclustered gi|1069949012|ref|XM_018429517.1| 763407 g72051 i0 100 0.131455399061033 28 0 13 0 101 128 1179 1206 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
14037649 14037649 PRJDB4470_P_NODE_53832_length_273_cov_1.647321_g52677_i0 PRJDB4470 53832 273 1.647321 4.49718633 Zychaea mexicana 64656 Fungi Fungi 315 2.9e-81   NTclustered gi|2432156198|ref|XM_053126766.1| 64656 g52677 i0 87.823 98.3956043956044 271 30 99 3 2 270 341 72 Zychaea mexicana 60S ribosomal protein L44 (BDB00DRAFT_870918), partial mRNA blastn 26862 315 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
16586853 16586853 PRJDB4470_P_NODE_99674_length_170_cov_1.264463_g98519_i0 PRJDB4470 99674 170 1.264463 2.1495871 Lichtheimia ornata 688661 Fungi Fungi 141 2.95e-29   NTclustered gi|2553584991|ref|XM_058487485.1| 688661 g98519 i0 86.154 8.2529411764705891 130 18 76 0 12 141 76 205 Lichtheimia ornata 60S ribosomal protein L37a (O0I10_007469), partial mRNA blastn 1403 141 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
17559380 17559380 PRJDB4470_P_NODE_90394_length_182_cov_1.586466_g89239_i0 PRJDB4470 90394 182 1.586466 2.88736812 Mucor 4830 Fungi Fungi 195 2.43e-45   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g89239 i0 87.879 78.4835164835165 165 20 91 0 4 168 2196 2032 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 14284 195 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;