RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJDB4470" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4470 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9509 9509 PRJDB4470_P_NODE_41681_length_333_cov_7.957746_g40529_i0 PRJDB4470 41681 333 7.957746 26.49929418 Encephalitozoon romaleae 571949 Fungi Fungi 82.4 4e-11   NTclustered gi|210076707|gb|FJ026013.1| 571949 g40529 i0 97.872 0.141141141141141 47 1 14 0 254 300 615 569 Encephalitozoon sp. SJ-2008 16S small subunit ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S large subunit ribosomal RNA gene, partial sequence blastn 47 82.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon romaleae
7661701 7661701 PRJDB4470_P_NODE_30747_length_413_cov_1.285714_g29602_i0 PRJDB4470 30747 413 1.285714 5.30999882 Microsporidium sp. Loire 1032359 Fungi Fungi 763 0   NTclustered gi|333036714|gb|HM566198.1| 1032359 g29602 i0 100 94.8523002421308 413 0 100 0 1 413 333 745 Microsporidium sp. Loire small subunit ribosomal RNA gene, partial sequence blastn 39174 763 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. Loire
8936842 8936842 PRJDB4470_P_NODE_86488_length_188_cov_1.424460_g85333_i0 PRJDB4470 86488 188 1.42446 2.6779848 Vittaforma corneae 42399 Fungi Fungi 108 3.39e-19   NTclustered gi|667639983|ref|XR_552275.1| 993615 g85333 i0 95.522 37.936170212766 67 3 36 0 122 188 922 988 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 7132 108 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;