RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJDB4470" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4470 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2559470 2559470 PRJDB4470_P_NODE_53163_length_276_cov_0.916300_g52008_i0 PRJDB4470 53163 276 0.9163 2.528988 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 246 1.08e-60   NTclustered gi|2663986577|emb|OY756918.1| 59785 g52008 i0 84.674 49.7536231884058 261 24 95 13 1 261 3989 4233 Myxobolus squamalis isolate 71B08 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 13732 246 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
7661431 7661431 PRJDB4470_P_NODE_118407_length_163_cov_0.912281_g117252_i0 PRJDB4470 118407 163 0.912281 1.48701803 Symplectoscyphus tricuspidatus 308614 Cnidaria other_Eukaryota 93.5 8.01e-15   NTclustered gi|1006165264|gb|KT190774.1| 308614 g117252 i0 83.036 15.0981595092025 112 9 67 6 5 113 2489 2385 Symplectoscyphus tricuspidatus voucher MBM240558 clone STNB12P212-1, P213-1 28S ribosomal RNA gene, partial sequence blastn 2461 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Sertulariidae Symplectoscyphus Symplectoscyphus tricuspidatus
11487351 11487351 PRJDB4470_P_NODE_30150_length_418_cov_1.978320_g29008_i0 PRJDB4470 30150 418 1.97832 8.2693776 Parvicapsula sp. SPS-2018 2806882 Cnidaria other_Eukaryota 126 2.34e-24   NTclustered gi|1444845538|gb|MH729074.1| 2806882 g29008 i0 85.484 2.67464114832536 124 15 30 3 292 415 1858 1978 Parvicapsula sp. SPS-2018 isolate JejuCJGd-2018 large subunit ribosomal RNA gene, partial sequence blastn 1118 126 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula sp. SPS-2018
18833097 18833097 PRJDB4470_P_NODE_51035_length_285_cov_1.762712_g49881_i0 PRJDB4470 51035 285 1.762712 5.0237292 Henneguya 35590 Cnidaria other_Eukaryota 132 3.29e-26   NTclustered gi|241911746|gb|FJ417052.1| 650981 g49881 i0 93.333 28.7719298245614 90 4 31 2 193 281 2244 2156 Henneguya sp. M0375 28S large subunit ribosomal RNA gene, partial sequence blastn 8200 132 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Henneguya Henneguya sp. M0375

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;