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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJDB4470" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJDB4470 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1284176 1284176 PRJDB4470_P_NODE_89402_length_184_cov_1.007407_g88247_i0 PRJDB4470 89402 184 1.007407 1.85362888 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 235 1.4499999999999998e-57   NTclustered gi|820695469|tpe|LN714488.1| 572307 g88247 i0 95.302 37.3152173913044 149 5 100 2 1 149 300046 299900 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 6866 235 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
2256622 2256622 PRJDB4470_P_NODE_65382_length_233_cov_1.413043_g64227_i0 PRJDB4470 65382 233 1.413043 3.29239019 Litostomatea 5988 SAR_Eukaryotes SAR_Eukaryotes 348 2.37e-91   NTclustered gi|1226859313|gb|MF474356.1| 394801 g64227 i0 93.59 72.519313304721 234 13 100 2 1 233 1334 1566 Lacrymaria marina isolate QZS2013110504 large subunit ribosomal RNA gene, partial sequence blastn 16897 348 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Lacrymariidae Lacrymaria Lacrymaria marina
2558941 2558941 PRJDB4470_P_NODE_107283_length_166_cov_0.888889_g106128_i0 PRJDB4470 107283 166 0.888889 1.47555574 Helkesimastix marina 645121 SAR_Eukaryotes SAR_Eukaryotes 307 2.69e-79   NTclustered gi|237687967|gb|FJ410915.1| 645121 g106128 i0 100 54.1144578313253 166 0 100 0 1 166 1516 1351 Helkesimastix sp. ATCC 50328 18S ribosomal RNA gene, partial sequence blastn 8983 307 1 Eukaryota Sar   Cercozoa     Helkesimastigidae Helkesimastix Helkesimastix marina
2559641 2559641 PRJDB4470_P_NODE_74263_length_211_cov_1.185185_g73108_i0 PRJDB4470 74263 211 1.185185 2.50074035 Minutocellus polymorphus 265543 SAR_Eukaryotes SAR_Eukaryotes 128 2.99e-25   NTclustered gi|2632235292|gb|OR922674.1| 265543 g73108 i0 94.118 34.4502369668246 85 4 40 1 1 84 3982 4066 Minutocellus polymorphus strain AGSB0025 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7269 128 1 Eukaryota Sar   Bacillariophyta Mediophyceae Cymatosirales Cymatosiraceae Minutocellus Minutocellus polymorphus
3531991 3531991 PRJDB4470_P_NODE_55403_length_267_cov_0.935780_g54248_i0 PRJDB4470 55403 267 0.93578 2.4985326 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 333 7.789999999999999e-87   NTclustered gi|325181427|emb|FR824061.1| 890382 g54248 i0 89.219 2.01498127340824 269 25 100 4 1 267 114706 114972 Albugo laibachii Nc14, genomic contig CONTIG_16_NC14_v4_210924_216 blastn 538 333 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
3835700 3835700 PRJDB4470_P_NODE_46024_length_309_cov_3.607692_g44871_i0 PRJDB4470 46024 309 3.607692 11.14776828 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 385 2.499999999999999e-102   NTclustered gi|2727570083|gb|PP760457.1| 568390 g44871 i0 90.169 49.5339805825243 295 29 95 0 14 308 40005 39711 Leukarachnion sp. ATCC PRA-24 culture ATCC:BJ-24B2 mitochondrion, complete genome blastn 15306 385 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
3835916 3835916 PRJDB4470_P_NODE_71984_length_216_cov_1.197605_g70829_i0 PRJDB4470 71984 216 1.197605 2.5868268 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 357 3.61e-94   NTclustered gi|1624698154|ref|XM_029013945.1| 189622 g70829 i0 96.759 29.4814814814815 216 4 100 2 1 216 90 302 Babesia ovata vWA domain-like family protein, putative (BOVATA_050280), partial mRNA blastn 6368 357 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
4809146 4809146 PRJDB4470_P_NODE_107064_length_166_cov_0.888889_g105909_i0 PRJDB4470 107064 166 0.888889 1.47555574 root 1 Root_unresolved Root_unresolved 307 2.69e-79   NTclustered gi|166044505|emb|CU367414.1| 100861 g105909 i0 100 81.2831325301205 166 0 100 0 1 166 344 509 Aphanomyces euteiches cDNA blastn 13493 307 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
5111851 5111851 PRJDB4470_P_NODE_34425_length_382_cov_9.315315_g33276_i0 PRJDB4470 34425 382 9.315315 35.5845033 Dysteria brasiliensis 497733 SAR_Eukaryotes SAR_Eukaryotes 311 5.4400000000000005e-80   NTclustered gi|1216628402|gb|KX099196.1| 497733 g33276 i0 84.858 69.9528795811518 317 38 82 7 1 312 312 1 Dysteria brasiliensis clone DB3 28S ribosomal RNA gene, partial sequence blastn 26722 311 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Dysteriidae Dysteria Dysteria brasiliensis
6084624 6084624 PRJDB4470_P_NODE_98425_length_171_cov_2.090164_g97270_i0 PRJDB4470 98425 171 2.090164 3.57418044 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|117575160|emb|AM055942.3| 383379 g97270 i0 94.444 4.33333333333333 36 1 20 1 52 86 773073 773108 Toxoplasma gondii RH, genomic DNA chromosome Ia blastn 741 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
6387885 6387885 PRJDB4470_P_NODE_55486_length_266_cov_2.635945_g54331_i0 PRJDB4470 55486 266 2.635945 7.0116137 Chaetoceros similis 1366869 SAR_Eukaryotes SAR_Eukaryotes 117 8.5e-22   NTclustered gi|2632235327|gb|OR922709.1| 1366869 g54331 i0 84.746 3.07518796992481 118 17 44 1 149 266 3932 4048 Chaetoceros similis strain AGSB0114 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 818 117 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros similis
7661608 7661608 PRJDB4470_P_NODE_21947_length_509_cov_4.202174_g20828_i0 PRJDB4470 21947 509 4.202174 21.38906566 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 743 0   NTclustered gi|146762526|gb|EF553458.1| 2850 g20828 i0 93.124 100.318271119843 509 32 99 3 2 509 4571 4065 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 51062 743 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
7661695 7661695 PRJDB4470_P_NODE_30327_length_416_cov_3.686649_g29185_i0 PRJDB4470 30327 416 3.686649 15.33645984 Nitzschia sp. (in: diatoms) 1884248 SAR_Eukaryotes SAR_Eukaryotes 126 2.32e-24   NTclustered gi|2632235302|gb|OR922684.1| 1884248 g29185 i0 87.273 0.264423076923077 110 14 26 0 204 313 3592 3483 Nitzschia sp. (in: diatoms) strain AGSB0041 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 110 126 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia sp. (in: diatoms)
7661951 7661951 PRJDB4470_P_NODE_56867_length_261_cov_1.948113_g55712_i0 PRJDB4470 56867 261 1.948113 5.08457493 Lagenidium deciduum 884619 SAR_Eukaryotes SAR_Eukaryotes 442 1.2099999999999994e-119   NTclustered gi|320578977|gb|HQ395660.1| 884619 g55712 i0 99.587 95.2643678160919 242 1 93 0 20 261 3 244 Lagenidium sp. PWL-2010c strain CBS 127042 28S ribosomal RNA gene, partial sequence blastn 24864 442 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium deciduum
8634537 8634537 PRJDB4470_P_NODE_86887_length_187_cov_1.884058_g85732_i0 PRJDB4470 86887 187 1.884058 3.52318846 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 315 1.85e-81   NTclustered gi|33520249|gb|AY273994.1| 127444 g85732 i0 97.297 99.7647058823529 185 5 99 0 3 187 258 442 Pythium undulatum large subunit ribosomal RNA gene, partial sequence blastn 18656 318 0.990566037735849 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Elongisporangium Elongisporangium undulatum
8936859 8936859 PRJDB4470_P_NODE_88408_length_185_cov_1.500000_g87253_i0 PRJDB4470 88408 185 1.5 2.775 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 296 6.61e-76   NTclustered gi|1837628855|gb|MN158348.1| 5909 g87253 i0 100 83.3351351351351 160 0 86 0 26 185 4204 4363 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 15417 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
10212536 10212536 PRJDB4470_P_NODE_65009_length_234_cov_1.664865_g63854_i0 PRJDB4470 65009 234 1.664865 3.8957841 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|829099384|ref|XM_971547.2| 312017 g63854 i0 100 0.123931623931624 29 0 12 0 69 97 1809 1837 Tetrahymena thermophila SB210 MIR domain protein partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
10212802 10212802 PRJDB4470_P_NODE_97749_length_172_cov_1.658537_g96594_i0 PRJDB4470 97749 172 1.658537 2.85268364 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|145505128|ref|XM_001438494.1| 5888 g96594 i0 100 0.325581395348837 28 0 16 0 112 139 294 267 Paramecium tetraurelia uncharacterized protein (GSPATT00000846001), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
15311783 15311783 PRJDB4470_P_NODE_54433_length_270_cov_7.113122_g53278_i0 PRJDB4470 54433 270 7.113122 19.2054294 Mayamaea permitis 1302819 SAR_Eukaryotes SAR_Eukaryotes 350 7.84e-92   NTclustered gi|168145888|emb|AM710524.1| 1302819 g53278 i0 91.732 92.862962962963 254 17 94 3 1 254 294 45 Mayamaea atomus var. permitis partial 28S rRNA gene, strain AT-101Gel04 blastn 25073 350 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea permitis
16284074 16284074 PRJDB4470_P_NODE_78693_length_201_cov_3.203947_g77538_i0 PRJDB4470 78693 201 3.203947 6.43993347 root 1 Root_unresolved Root_unresolved 337 4.309999999999999e-88   NTclustered gi|10832|emb|X54512.1| 5911 g77538 i0 100 84.5970149253731 182 0 91 0 20 201 8128 8309 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 17004 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19134891 19134891 PRJDB4470_P_NODE_27176_length_447_cov_42.331658_g26038_i0 PRJDB4470 27176 447 42.331658 189.22251126 Epistylis sp. 6 2979169 SAR_Eukaryotes SAR_Eukaryotes 702 0   NTclustered gi|2304601482|gb|OP458303.1| 2979169 g26038 i0 98.254 88.2170022371365 401 7 90 0 47 447 1 401 Epistylis sp. 6 large subunit ribosomal RNA gene, partial sequence blastn 39433 702 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. 6
20410385 20410385 PRJDB4470_P_NODE_72157_length_215_cov_2.463855_g71002_i0 PRJDB4470 72157 215 2.463855 5.29728825 Paramecium caudatum 5885 SAR_Eukaryotes SAR_Eukaryotes 359 9.969999999999999e-95   NTclustered gi|299830252|ref|NC_014262.1| 5885 g71002 i0 100 30.3720930232558 194 0 90 0 22 215 15220 15027 Paramecium caudatum mitochondrion, complete genome blastn 6530 359 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
22658196 22658196 PRJDB4470_P_NODE_100838_length_169_cov_0.866667_g99683_i0 PRJDB4470 100838 169 0.866667 1.46466723 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 302 1.27e-77   NTclustered gi|323690576|gb|GU935635.1| 88167 g99683 i0 100 88.6272189349112 163 0 96 0 7 169 1724 1562 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 14978 302 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
24235537 24235537 PRJDB4470_P_NODE_63740_length_238_cov_1.333333_g62585_i0 PRJDB4470 63740 238 1.333333 3.17333254 Attheya longicornis 451786 SAR_Eukaryotes SAR_Eukaryotes 99 2.71e-16   NTclustered gi|2046217437|gb|MW729336.1| 451786 g62585 i0 78.808 5.16806722689076 151 28 62 4 91 238 38496 38347 Attheya longicornis mitochondrion, complete genome blastn 1230 99 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Attheyaceae Attheya Attheya longicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;