contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJDB4470" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1283971 | 1283971 | PRJDB4470_P_NODE_65782_length_232_cov_1.103825_g64627_i0 | PRJDB4470 | 65782 | 232 | 1.103825 | 2.560874 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 230 | 8.929999999999999e-56 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g64627 | i0 | 84.848 | 37.9353448275862 | 231 | 32 | 99 | 3 | 1 | 230 | 3047922 | 3047694 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 8801 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 1284059 | 1284059 | PRJDB4470_P_NODE_76182_length_206_cov_3.560510_g75027_i0 | PRJDB4470 | 76182 | 206 | 3.56051 | 7.3346506 | Polystyrenella longa | 2528007 | Bacteria | Bacteria | 215 | 2.17e-51 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g75027 | i0 | 87.912 | 42.9708737864078 | 182 | 22 | 88 | 0 | 4 | 185 | 1415656 | 1415475 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 8852 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 3835880 | 3835880 | PRJDB4470_P_NODE_67284_length_227_cov_3.129213_g66129_i0 | PRJDB4470 | 67284 | 227 | 3.129213 | 7.10331351 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g66129 | i0 | 100 | 0.127753303964758 | 29 | 0 | 13 | 0 | 178 | 206 | 1818139 | 1818111 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 6387971 | 6387971 | PRJDB4470_P_NODE_66066_length_231_cov_1.401099_g64911_i0 | PRJDB4470 | 66066 | 231 | 1.401099 | 3.23653869 | Bremerella sp. P1 | 3026424 | Bacteria | Bacteria | 222 | 1.4899999999999999e-53 | NTclustered | gi|2446655020|gb|CP118164.1| | 3026424 | g64911 | i0 | 93.333 | 1.94805194805195 | 150 | 10 | 65 | 0 | 66 | 215 | 2122794 | 2122645 | Bremerella sp. P1 chromosome, complete genome | blastn | 450 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella sp. P1 | |
| 7662053 | 7662053 | PRJDB4470_P_NODE_67487_length_227_cov_1.432584_g66332_i0 | PRJDB4470 | 67487 | 227 | 1.432584 | 3.25196568 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 231 | 2.4199999999999997e-56 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g66332 | i0 | 85.345 | 12.9471365638767 | 232 | 24 | 100 | 10 | 1 | 227 | 3862168 | 3862394 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 2939 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 8936460 | 8936460 | PRJDB4470_P_NODE_41128_length_337_cov_1.625000_g39976_i0 | PRJDB4470 | 41128 | 337 | 1.625 | 5.47625 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 335 | 2.819999999999999e-87 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g39976 | i0 | 85.583 | 208.522255192878 | 326 | 40 | 97 | 4 | 1 | 326 | 1867539 | 1867221 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 70272 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 8936475 | 8936475 | PRJDB4470_P_NODE_42948_length_326_cov_2.870036_g41795_i0 | PRJDB4470 | 42948 | 326 | 2.870036 | 9.35631736 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 569 | 6.839999999999998e-158 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g41795 | i0 | 98.16 | 163.70245398773 | 326 | 6 | 100 | 0 | 1 | 326 | 345 | 670 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 53367 | 569 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 10212695 | 10212695 | PRJDB4470_P_NODE_83289_length_193_cov_1.416667_g82134_i0 | PRJDB4470 | 83289 | 193 | 1.416667 | 2.73416731 | Thalassoglobus polymorphus | 2527994 | Bacteria | Bacteria | 228 | 2.579999999999999e-55 | NTclustered | gi|1712486265|gb|CP036267.1| | 2527994 | g82134 | i0 | 90.698 | 30.5233160621762 | 172 | 14 | 89 | 2 | 1 | 171 | 5085671 | 5085501 | Thalassoglobus polymorphus strain Mal48 chromosome | blastn | 5891 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Thalassoglobus | Thalassoglobus polymorphus | |
| 12762855 | 12762855 | PRJDB4470_P_NODE_22491_length_502_cov_1.962472_g21370_i0 | PRJDB4470 | 22491 | 502 | 1.962472 | 9.85160944 | Bremerella sp. P1 | 3026424 | Bacteria | Bacteria | 640 | 8.229999999999999e-179 | NTclustered | gi|2446655020|gb|CP118164.1| | 3026424 | g21370 | i0 | 91.102 | 2.77290836653386 | 472 | 42 | 94 | 0 | 17 | 488 | 318591 | 318120 | Bremerella sp. P1 chromosome, complete genome | blastn | 1392 | 640 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella sp. P1 | |
| 15009186 | 15009186 | PRJDB4470_P_NODE_36092_length_370_cov_1.535826_g34940_i0 | PRJDB4470 | 36092 | 370 | 1.535826 | 5.6825562 | Bremerella | 2714594 | Bacteria | Bacteria | 231 | 4.209999999999998e-56 | NTclustered | gi|1712647354|gb|CP036289.1| | 2527984 | g34940 | i0 | 78.628 | 166.745945945946 | 379 | 59 | 99 | 19 | 1 | 363 | 2674318 | 2674690 | Bremerella volcania strain Pan97 chromosome, complete genome | blastn | 61696 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella volcania | |
| 15311805 | 15311805 | PRJDB4470_P_NODE_56433_length_263_cov_1.144860_g55278_i0 | PRJDB4470 | 56433 | 263 | 1.14486 | 3.0109818 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 248 | 2.8499999999999997e-61 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g55278 | i0 | 83.955 | 140.285171102662 | 268 | 34 | 100 | 9 | 1 | 263 | 320151 | 320414 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 36895 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 15311830 | 15311830 | PRJDB4470_P_NODE_59693_length_251_cov_1.514851_g58538_i0 | PRJDB4470 | 59693 | 251 | 1.514851 | 3.80227601 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 375 | 1.1899999999999998e-99 | NTclustered | gi|2921913114|gb|CP182803.1| | 2026777 | g58538 | i0 | 93.625 | 161.99203187251 | 251 | 16 | 100 | 0 | 1 | 251 | 1301779 | 1302029 | MAG: Phycisphaeraceae bacterium isolate amkv24 chromosome, complete genome | blastn | 40660 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 15312044 | 15312044 | PRJDB4470_P_NODE_85793_length_189_cov_1.407143_g84638_i0 | PRJDB4470 | 85793 | 189 | 1.407143 | 2.65950027 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 233 | 5.399999999999999e-57 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g84638 | i0 | 88.889 | 188.936507936508 | 189 | 21 | 100 | 0 | 1 | 189 | 4467690 | 4467502 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 35709 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 16586267 | 16586267 | PRJDB4470_P_NODE_3134_length_1280_cov_15.156783_g2697_i0 | PRJDB4470 | 3134 | 1280 | 15.156783 | 194.0068224 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 1085 | 0 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g2697 | i0 | 85.377 | 168.49453125 | 1060 | 139 | 82 | 10 | 179 | 1225 | 3862490 | 3861434 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 215673 | 1085 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 17861091 | 17861091 | PRJDB4470_P_NODE_17935_length_574_cov_6.099048_g16864_i0 | PRJDB4470 | 17935 | 574 | 6.099048 | 35.00853552 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 244 | 8.71e-60 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g16864 | i0 | 78.607 | 247.905923344948 | 402 | 63 | 67 | 16 | 50 | 436 | 582 | 189 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 142298 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 19135181 | 19135181 | PRJDB4470_P_NODE_57696_length_258_cov_1.679426_g56541_i0 | PRJDB4470 | 57696 | 258 | 1.679426 | 4.33291908 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2874253676|emb|OY969110.1| | 305355 | g56541 | i0 | 94.286 | 0.255813953488372 | 35 | 2 | 14 | 0 | 90 | 124 | 99609 | 99643 | MAG: uncultured Chlamydiae bacterium isolate MFD00082.bin.c.5 genome assembly, chromosome: 1 | blastn | 66 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 22658326 | 22658326 | PRJDB4470_P_NODE_49278_length_293_cov_1.934426_g48125_i0 | PRJDB4470 | 49278 | 293 | 1.934426 | 5.66786818 | Phycisphaerae | 666505 | Bacteria | Bacteria | 375 | 1.4199999999999998e-99 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g48125 | i0 | 89.796 | 88.5529010238908 | 294 | 28 | 100 | 2 | 1 | 293 | 1831011 | 1831303 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 25946 | 377 | 0.994694960212202 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;