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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJDB3785" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB3785 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1282996 1282996 PRJDB3785_S_NODE_14722_length_202_cov_1.607843_g14569_i0 PRJDB3785 14722 202 1.607843 3.24784286 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.018   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g14569 i0 91.892 0.183168316831683 37 3 18 0 149 185 10553795 10553759 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 37 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
1283066 1283066 PRJDB3785_S_NODE_20342_length_176_cov_2.000000_g20189_i0 PRJDB3785 20342 176 2 3.52 Dreissena polymorpha 45954 Mollusca Mollusca 65.8 1.91e-6   NTclustered gi|2364289613|ref|XM_052389720.1| 45954 g20189 i0 88.679 0.301136363636364 53 6 30 0 89 141 159 211 PREDICTED: Dreissena polymorpha 14-3-3 protein epsilon-like (LOC127854654), mRNA blastn 53 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
5111223 5111223 PRJDB3785_S_NODE_20265_length_177_cov_0.828125_g20112_i0 PRJDB3785 20265 177 0.828125 1.46578125 Corbicula fluminea 45949 Mollusca Mollusca 135 1.44e-27   NTclustered gi|619498806|gb|KJ461738.1| 45949 g20112 i0 83.448 64.7683615819209 145 24 82 0 13 157 696 840 Corbicula fluminea clone 01024008 heat shock protein 70 (HSP70) mRNA, complete cds blastn 11464 135 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Cyrenidae Corbicula Corbicula fluminea
8935674 8935674 PRJDB3785_S_NODE_11308_length_226_cov_1.700565_g11155_i0 PRJDB3785 11308 226 1.700565 3.8432769 Patella vulgata 6465 Mollusca Mollusca 206 1.4599999999999998e-48   NTclustered gi|2296443958|ref|XM_050562767.1| 6465 g11155 i0 83.111 71.5 225 38 99 0 2 226 314 90 PREDICTED: Patella vulgata tubulin beta chain-like (LOC126832082), mRNA blastn 16159 206 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
10211601 10211601 PRJDB3785_S_NODE_14509_length_203_cov_2.292208_g14356_i0 PRJDB3785 14509 203 2.292208 4.65318224 Haliphron sp. ARL-2004 283040 Mollusca Mollusca 187 4.65e-43   NTclustered gi|50346986|gb|AY557410.1| 283040 g14356 i0 83.582 98.9458128078818 201 31 99 2 3 202 323 124 Haliphron sp. ARL-2004 histone H3 pseudogene, partial sequence blastn 20086 187 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Alloposidae Haliphron Haliphron sp. ARL-2004
11486671 11486671 PRJDB3785_S_NODE_15630_length_197_cov_1.371622_g15477_i0 PRJDB3785 15630 197 1.371622 2.70209534 Perna viridis 73031 Mollusca Mollusca 122 1.2799999999999999e-23   NTclustered gi|1205912005|gb|KY568778.1| 73031 g15477 i0 83.721 5.03553299492386 129 21 65 0 28 156 103 231 Perna viridis voucher SS26 histone H3 (H3) gene, partial cds blastn 992 122 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Perna Perna viridis
11486781 11486781 PRJDB3785_S_NODE_24450_length_165_cov_0.879310_g24297_i0 PRJDB3785 24450 165 0.87931 1.4508615 Patella vulgata 6465 Mollusca Mollusca 134 4.7900000000000005e-27   NTclustered gi|2506319584|ref|XM_050540791.2| 6465 g24297 i0 82.166 4.36363636363636 157 26 95 2 1 156 428 583 PREDICTED: Patella vulgata transmembrane emp24 domain-containing protein eca (LOC126815232), transcript variant X2, mRNA blastn 720 134 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
14036859 14036859 PRJDB3785_S_NODE_20492_length_176_cov_1.181102_g20339_i0 PRJDB3785 20492 176 1.181102 2.07873952 Haliotis rubra 36100 Mollusca Mollusca 78.7 2.45e-10   NTclustered gi|2194101406|ref|XM_046706881.1| 36100 g20339 i0 89.231 0.75 65 3 38 4 73 135 173 111 PREDICTED: Haliotis rubra transcription initiation factor TFIID subunit 11-like (LOC124271720), partial mRNA blastn 132 78.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
17860570 17860570 PRJDB3785_S_NODE_14915_length_201_cov_1.322368_g14762_i0 PRJDB3785 14915 201 1.322368 2.65795968 Littorina saxatilis 31220 Mollusca Mollusca 202 1.6399999999999998e-47   NTclustered gi|2868694932|ref|XM_070338369.1| 31220 g14762 i0 85.204 12.1890547263682 196 29 98 0 6 201 3035 2840 PREDICTED: Littorina saxatilis cilia- and flagella-associated protein 57-like (LOC138966228), mRNA blastn 2450 202 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
19134342 19134342 PRJDB3785_S_NODE_20676_length_175_cov_1.365079_g20523_i0 PRJDB3785 20676 175 1.365079 2.38888825 Antalis entalis 211836 Mollusca Mollusca 172 1.08e-38   NTclustered gi|82622142|gb|DQ280000.1| 211836 g20523 i0 84.706 19.4685714285714 170 26 97 0 1 170 2 171 Antalis entalis histone H3 gene, partial cds blastn 3407 172 1 Eukaryota Opisthokonta Metazoa Mollusca Scaphopoda Dentaliida Dentaliidae Antalis Antalis entalis
20409340 20409340 PRJDB3785_S_NODE_14077_length_206_cov_1.280255_g13924_i0 PRJDB3785 14077 206 1.280255 2.6373253 Bradybaena similaris 145626 Mollusca Mollusca 58.4 3.87e-4   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g13924 i0 100 0.587378640776699 31 0 15 0 99 129 35875858 35875888 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 121 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20409445 20409445 PRJDB3785_S_NODE_22197_length_170_cov_1.148760_g22044_i0 PRJDB3785 22197 170 1.14876 1.952892 Mya arenaria 6604 Mollusca Mollusca 99 1.8e-16   NTclustered gi|2427446032|ref|XM_052918054.1| 6604 g22044 i0 87.209 34.1352941176471 86 11 51 0 77 162 303 388 PREDICTED: Mya arenaria myosin heavy chain, striated muscle-like (LOC128212555), transcript variant X3, mRNA blastn 5803 99 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
25207282 25207282 PRJDB3785_S_NODE_9560_length_244_cov_5.666667_g9407_i0 PRJDB3785 9560 244 5.666667 13.82666748 Gastropoda 6448 Mollusca Mollusca 115 2.77e-21   NTclustered gi|1897914721|ref|XM_013091444.2| 6500 g9407 i0 85.345 10.4959016393443 116 11 48 3 129 244 1484 1375 PREDICTED: Aplysia californica tubulin alpha-1A chain (LOC101845985), mRNA blastn 2561 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;