RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJDB3785" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJDB3785 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1283047 1283047 PRJDB3785_S_NODE_18842_length_182_cov_1.563910_g18689_i0 PRJDB3785 18842 182 1.56391 2.8463162 Heterostelium album 2086695 Evosea other_Eukaryota 95.3 2.54e-15   NTclustered gi|1160573022|ref|XM_020576689.1| 670386 g18689 i0 82.407 0.901098901098901 108 19 59 0 30 137 406 513 Polysphondylium pallidum PN500 40S ribosomal protein S3 (rps3), partial mRNA blastn 164 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
2558828 2558828 PRJDB3785_S_NODE_703_length_967_cov_6.190632_g630_i0 PRJDB3785 703 967 6.190632 59.86341144 Dictyostelium discoideum 44689 Evosea other_Eukaryota 686 0   NTclustered gi|66820862|ref|XM_638894.1| 352472 g630 i0 80.663 91.229576008273 905 157 93 18 72 967 1131 236 Dictyostelium discoideum AX4 hypothetical protein (act20) mRNA, complete cds blastn 88219 686 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3834913 3834913 PRJDB3785_S_NODE_14024_length_206_cov_1.662420_g13871_i0 PRJDB3785 14024 206 1.66242 3.4245852 Dictyostelium discoideum 44689 Evosea other_Eukaryota 270 4.569999999999999e-68   NTclustered gi|66820523|ref|XM_638773.1| 352472 g13871 i0 90.338 92.9660194174757 207 18 100 2 1 206 214 9 Dictyostelium discoideum AX4 hypothetical protein (act22) mRNA, complete cds blastn 19151 270 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6387234 6387234 PRJDB3785_S_NODE_7946_length_266_cov_2.589862_g7793_i0 PRJDB3785 7946 266 2.589862 6.88903292 Dictyostelium purpureum 5786 Evosea other_Eukaryota 246 1.0399999999999999e-60   NTclustered gi|330793486|ref|XM_003284767.1| 5786 g7793 i0 85.062 83.8947368421053 241 36 91 0 1 241 266 26 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_91392), mRNA blastn 22316 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
8935961 8935961 PRJDB3785_S_NODE_9248_length_248_cov_2.175879_g9095_i0 PRJDB3785 9248 248 2.175879 5.39617992 Entamoeba dispar 46681 Evosea other_Eukaryota 202 2.0999999999999998e-47   NTclustered gi|167393182|ref|XM_001740406.1| 370354 g9095 i0 85.864 72.8629032258064 191 25 77 2 59 248 469 280 Entamoeba dispar SAW760 elongation factor 1-alpha (EDI_196620), partial mRNA blastn 18070 202 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
11184476 11184476 PRJDB3785_S_NODE_17329_length_189_cov_1.092857_g17176_i0 PRJDB3785 17329 189 1.092857 2.06549973 Entamoeba 5758 Evosea other_Eukaryota 167 5.549999999999999e-37   NTclustered gi|158940|gb|L02417.1|ENHEF2 5759 g17176 i0 88.028 6.38095238095238 142 15 75 2 2 142 428 288 Entamoeba histolytica translation elongation factor-2 (EF-2) mRNA, complete cds blastn 1206 167 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
12460377 12460377 PRJDB3785_S_NODE_4630_length_353_cov_2.282895_g4477_i0 PRJDB3785 4630 353 2.282895 8.05861935 Dictyostelium 5782 Evosea other_Eukaryota 167 1.14e-36   NTclustered gi|551445|emb|Z37981.1| 44689 g4477 i0 88.652 4.38243626062323 141 10 46 4 8 142 3202 3342 D.discoideum gene for protein kinase blastn 1547 167 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
16585564 16585564 PRJDB3785_S_NODE_14214_length_205_cov_1.538462_g14061_i0 PRJDB3785 14214 205 1.538462 3.1538471 Schizoplasmodiopsis vulgaris 435421 Evosea other_Eukaryota 222 1.29e-53   NTclustered gi|159082997|gb|EF513198.1| 435421 g14061 i0 86.341 76.1756097560976 205 26 99 2 1 204 249 46 Schizoplasmodiopsis vulgaris elongation factor 1A (EF1A) gene, partial cds blastn 15616 222 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis vulgaris
20409461 20409461 PRJDB3785_S_NODE_24217_length_165_cov_1.974138_g24064_i0 PRJDB3785 24217 165 1.974138 3.2573277 Acytostelium subglobosum 361139 Evosea other_Eukaryota 82.4 1.76e-11   NTclustered gi|831789132|ref|XM_012903508.1| 1410327 g24064 i0 91.667 0.363636363636364 60 3 36 2 1 59 717 775 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 60 82.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
23933615 23933615 PRJDB3785_S_NODE_24819_length_164_cov_1.773913_g24666_i0 PRJDB3785 24819 164 1.773913 2.90921732 Physarum 5790 Evosea other_Eukaryota 143 7.9e-30   NTclustered gi|2916681488|gb|PP948833.1| 31288 g24666 i0 84.667 87.8841463414634 150 16 90 7 5 151 524 379 Physarum sp. voucher HMJAU M20367-2 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 14413 143 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum sp.
23933626 23933626 PRJDB3785_S_NODE_9799_length_242_cov_1.098446_g9646_i0 PRJDB3785 9799 242 1.098446 2.65823932 Dictyostelium 5782 Evosea other_Eukaryota 303 5.45e-78   NTclustered gi|167579|gb|M14146.1|DDIACT15 44689 g9646 i0 90.129 96.4586776859504 233 23 96 0 10 242 640 872 D.discoideum actin 15 gene, complete cds blastn 23343 303 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;