RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJDB3785" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB3785 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6084337 6084337 PRJDB3785_S_NODE_15245_length_199_cov_1.686667_g15092_i0 PRJDB3785 15245 199 1.686667 3.35646733 Metazoa 33208 Cnidaria other_Eukaryota 191 3.51e-44   NTclustered gi|2744867187|ref|XM_065800345.1| 6087 g15092 i0 84.184 154.86432160804 196 31 98 0 1 196 214 409 PREDICTED: Hydra vulgaris polyubiquitin-B (LOC100203041), mRNA blastn 30818 191 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
6387140 6387140 PRJDB3785_S_NODE_27386_length_161_cov_0.901786_g27233_i0 PRJDB3785 27386 161 0.901786 1.45187546 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 52.8 0.013   NTclustered gi|1778020758|ref|XM_031714180.1| 6105 g27233 i0 100 0.173913043478261 28 0 17 0 55 82 785 812 PREDICTED: Actinia tenebrosa neurogenic locus notch homolog protein 1-like (LOC116304442), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
14036784 14036784 PRJDB3785_S_NODE_14512_length_203_cov_2.188312_g14359_i0 PRJDB3785 14512 203 2.188312 4.44227336 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 60.2 1.06e-4   NTclustered gi|1619661858|ref|XM_021049626.2| 2652724 g14359 i0 88 0.738916256157635 50 6 25 0 137 186 2036 1987 PREDICTED: Exaiptasia diaphana inverted formin-2 (LOC110243504), transcript variant X2, mRNA blastn 150 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
20107711 20107711 PRJDB3785_S_NODE_24596_length_165_cov_0.879310_g24443_i0 PRJDB3785 24596 165 0.87931 1.4508615 Metazoa 33208 Cnidaria other_Eukaryota 135 1.33e-27   NTclustered gi|1176065250|ref|XM_020747170.1| 48498 g24443 i0 88.393 26.6363636363636 112 13 68 0 7 118 113 2 PREDICTED: Orbicella faveolata tubulin beta chain-like (LOC110041849), mRNA blastn 4395 135 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;