RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJDB3785" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB3785 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3835165 3835165 PRJDB3785_S_NODE_8564_length_257_cov_3.485577_g8411_i0 PRJDB3785 8564 257 3.485577 8.95793289 Fimicolochytrium jonesii 1396493 Fungi Fungi 150 8.06e-32   NTclustered gi|2432072949|ref|XM_053073468.1| 1396493 g8411 i0 80.303 52.408560311284 198 39 77 0 55 252 696 499 Fimicolochytrium jonesii ubiquitin-related domain-containing protein (EV422DRAFT_586682), mRNA blastn 13469 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
8935845 8935845 PRJDB3785_S_NODE_28268_length_152_cov_2.446602_g28115_i0 PRJDB3785 28268 152 2.446602 3.71883504 Spizellomyces punctatus 109760 Fungi Fungi 137 3.34e-28   NTclustered gi|1027028346|ref|XM_016756817.1| 645134 g28115 i0 83.007 4.90131578947368 153 24 100 2 1 152 1683 1532 Spizellomyces punctatus DAOM BR117 ADP,ATP carrier protein 1, mitochondrial, variant (SPPG_08669), partial mRNA blastn 745 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
14036824 14036824 PRJDB3785_S_NODE_17892_length_186_cov_1.489051_g17739_i0 PRJDB3785 17892 186 1.489051 2.76963486 Polychytrium aggregatum 110093 Fungi Fungi 130 7.14e-26   NTclustered gi|2432164628|ref|XM_053113621.1| 110093 g17739 i0 89.32 11.2688172043011 103 11 55 0 33 135 1219 1117 Polychytrium aggregatum Adenosylhomocysteinase (BJ171DRAFT_570225), mRNA blastn 2096 130 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22960876 22960876 PRJDB3785_S_NODE_5719_length_315_cov_2.203008_g5566_i0 PRJDB3785 5719 315 2.203008 6.9394752 Fimicolochytrium jonesii 1396493 Fungi Fungi 243 1.6300000000000004e-59   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g5566 i0 80.952 29.3619047619048 315 53 98 5 1 310 642 954 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 9249 243 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;