RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB3785" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJDB3785 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8919 8919 PRJDB3785_S_NODE_3961_length_384_cov_7.970149_g3808_i0 PRJDB3785 3961 384 7.970149 30.60537216 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 117 1.28e-21   NTclustered gi|551580226|ref|XM_005775612.1| 280463 g3808 i0 83.206 4.8828125 131 19 33 2 48 175 746 616 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 1875 117 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
25207260 25207260 PRJDB3785_S_NODE_19880_length_178_cov_1.217054_g19727_i0 PRJDB3785 19880 178 1.217054 2.16635612 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 3.17e-19   NTclustered gi|551604847|ref|XM_005783816.1| 280463 g19727 i0 83.193 11.0393258426966 119 18 66 2 50 167 385 268 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 1965 108 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;