contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJDB14275" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1282869 | 1282869 | PRJDB14275_P_NODE_4942_length_228_cov_1.169312_g4883_i0 | PRJDB14275 | 4942 | 228 | 1.169312 | 2.66603136 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 339 | 1.3899999999999998e-88 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g4883 | i0 | 93.478 | 117.5 | 230 | 11 | 99 | 3 | 1 | 226 | 1914372 | 1914601 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 26790 | 339 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 1282892 | 1282892 | PRJDB14275_P_NODE_6962_length_171_cov_0.924242_g6903_i0 | PRJDB14275 | 6962 | 171 | 0.924242 | 1.58045382 | Streptococcus oralis | 1303 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|1878158384|gb|CP054134.1| | 1891914 | g6903 | i0 | 100 | 100 | 171 | 0 | 100 | 0 | 1 | 171 | 602122 | 601952 | Streptococcus oralis subsp. oralis strain SN51445 chromosome | blastn | 17100 | 316 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 2558498 | 2558498 | PRJDB14275_P_NODE_7823_length_158_cov_1.016807_g7764_i0 | PRJDB14275 | 7823 | 158 | 1.016807 | 1.60655506 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 292 | 7.07e-75 | NTclustered | gi|2180327910|gb|CP090991.1| | 1282 | g7764 | i0 | 100 | 108.721518987342 | 158 | 0 | 100 | 0 | 1 | 158 | 5918 | 5761 | Staphylococcus epidermidis strain 52B plasmid pSE52B-2, complete sequence | blastn | 17178 | 292 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 2558502 | 2558502 | PRJDB14275_P_NODE_8503_length_150_cov_1.054054_g8444_i0 | PRJDB14275 | 8503 | 150 | 1.054054 | 1.581081 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 239 | 8.74e-59 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g8444 | i0 | 95.364 | 626.546666666667 | 151 | 6 | 100 | 1 | 1 | 150 | 375034 | 374884 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 93982 | 239 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 3834794 | 3834794 | PRJDB14275_P_NODE_4944_length_228_cov_0.962963_g4885_i0 | PRJDB14275 | 4944 | 228 | 0.962963 | 2.19555564 | Dolosigranulum pigrum | 29394 | Bacteria | Bacteria | 416 | 6.259999999999998e-112 | NTclustered | gi|2020672664|gb|CP040417.1| | 29394 | g4885 | i0 | 99.561 | 44.0043859649123 | 228 | 1 | 100 | 0 | 1 | 228 | 575267 | 575494 | Dolosigranulum pigrum strain KPL3077 chromosome | blastn | 10033 | 416 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 3834827 | 3834827 | PRJDB14275_P_NODE_8004_length_155_cov_1.750000_g7945_i0 | PRJDB14275 | 8004 | 155 | 1.75 | 2.7125 | Finegoldia magna | 1260 | Bacteria | Bacteria | 287 | 3.21e-73 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g7945 | i0 | 100 | 14.6064516129032 | 155 | 0 | 100 | 0 | 1 | 155 | 182624 | 182470 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 2264 | 287 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 6084256 | 6084256 | PRJDB14275_P_NODE_5085_length_222_cov_2.322404_g5026_i0 | PRJDB14275 | 5085 | 222 | 2.322404 | 5.15573688 | Abiotrophia | 46123 | Bacteria | Bacteria | 392 | 1.0199999999999999e-104 | NTclustered | gi|1848537030|gb|CP053988.1| | 46125 | g5026 | i0 | 99.537 | 505.220720720721 | 216 | 0 | 97 | 1 | 8 | 222 | 863627 | 863412 | Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome | blastn | 112159 | 392 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Abiotrophia | Abiotrophia defectiva | ||
| 7660932 | 7660932 | PRJDB14275_P_NODE_6947_length_171_cov_1.242424_g6888_i0 | PRJDB14275 | 6947 | 171 | 1.242424 | 2.12454504 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|2505659350|gb|CP118842.1| | 1282 | g6888 | i0 | 100 | 99.9824561403509 | 171 | 0 | 100 | 0 | 1 | 171 | 151667 | 151497 | Staphylococcus epidermidis strain 7049 chromosome, complete genome | blastn | 17097 | 316 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8935608 | 8935608 | PRJDB14275_P_NODE_6548_length_179_cov_1.157143_g6489_i0 | PRJDB14275 | 6548 | 179 | 1.157143 | 2.07128597 | Finegoldia magna | 1260 | Bacteria | Bacteria | 303 | 3.79e-78 | NTclustered | gi|1848608259|gb|CP054000.1| | 1260 | g6489 | i0 | 97.207 | 5.9776536312849204 | 179 | 5 | 100 | 0 | 1 | 179 | 598205 | 598027 | Finegoldia magna strain FDAARGOS_764 chromosome, complete genome | blastn | 1070 | 303 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 11486511 | 11486511 | PRJDB14275_P_NODE_5030_length_224_cov_1.983784_g4971_i0 | PRJDB14275 | 5030 | 224 | 1.983784 | 4.44367616 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 375 | 1.04e-99 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g4971 | i0 | 96.875 | 8.97767857142857 | 224 | 7 | 100 | 0 | 1 | 224 | 550437 | 550214 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 2011 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 12460323 | 12460323 | PRJDB14275_P_NODE_7530_length_162_cov_1.308943_g7471_i0 | PRJDB14275 | 7530 | 162 | 1.308943 | 2.12048766 | Staphylococcus | 1279 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2071692135|gb|CP073824.1| | 1282 | g7471 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 1472066 | 1472227 | Staphylococcus epidermidis strain B1200599 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12460331 | 12460331 | PRJDB14275_P_NODE_830_length_836_cov_5.494354_g789_i0 | PRJDB14275 | 830 | 836 | 5.494354 | 45.93279944 | Streptococcus | 1301 | Bacteria | Bacteria | 1485 | 0 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g789 | i0 | 99.27 | 335.648325358852 | 822 | 6 | 98 | 0 | 1 | 822 | 903377 | 902556 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 280602 | 1496 | 0.992647058823529 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 14036649 | 14036649 | PRJDB14275_P_NODE_4712_length_237_cov_7.338384_g4653_i0 | PRJDB14275 | 4712 | 237 | 7.338384 | 17.39197008 | Salinicoccus halodurans | 407035 | Bacteria | Bacteria | 368 | 1.86e-97 | NTclustered | gi|820755876|gb|CP011366.1| | 407035 | g4653 | i0 | 97.664 | 406.177215189873 | 214 | 5 | 90 | 0 | 1 | 214 | 374500 | 374287 | Salinicoccus halodurans strain H3B36, complete genome | blastn | 96264 | 368 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Salinicoccus | Salinicoccus halodurans | ||
| 15008937 | 15008937 | PRJDB14275_P_NODE_4092_length_271_cov_1.275862_g4033_i0 | PRJDB14275 | 4092 | 271 | 1.275862 | 3.45758602 | Staphylococcus | 1279 | Bacteria | Bacteria | 477 | 3.4599999999999986e-130 | NTclustered | gi|2536852070|gb|CP129374.1| | 1282 | g4033 | i0 | 98.519 | 99.6309963099631 | 270 | 4 | 99 | 0 | 1 | 270 | 2402505 | 2402236 | Staphylococcus epidermidis strain CSMH-411EB chromosome, complete genome | blastn | 27000 | 477 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 17860478 | 17860478 | PRJDB14275_P_NODE_6835_length_173_cov_1.208955_g6776_i0 | PRJDB14275 | 6835 | 173 | 1.208955 | 2.09149215 | Finegoldia magna | 1260 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|1848608259|gb|CP054000.1| | 1260 | g6776 | i0 | 100 | 6 | 173 | 0 | 100 | 0 | 1 | 173 | 197842 | 197670 | Finegoldia magna strain FDAARGOS_764 chromosome, complete genome | blastn | 1038 | 320 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 20107642 | 20107642 | PRJDB14275_P_NODE_6116_length_189_cov_0.806667_g6057_i0 | PRJDB14275 | 6116 | 189 | 0.806667 | 1.52460063 | Staphylococcus | 1279 | Bacteria | Bacteria | 331 | 1.86e-86 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g6057 | i0 | 98.413 | 101 | 189 | 2 | 100 | 1 | 1 | 189 | 2173095 | 2173282 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 19089 | 331 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 20107676 | 20107676 | PRJDB14275_P_NODE_8296_length_152_cov_0.867257_g8237_i0 | PRJDB14275 | 8296 | 152 | 0.867257 | 1.31823064 | Staphylococcus | 1279 | Bacteria | Bacteria | 265 | 1.47e-66 | NTclustered | gi|2359411665|gb|CP110784.1| | 29388 | g8237 | i0 | 98.026 | 30.1315789473684 | 152 | 3 | 100 | 0 | 1 | 152 | 2095245 | 2095396 | Staphylococcus capitis strain CCSM0123 chromosome, complete genome | blastn | 4580 | 265 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 23933554 | 23933554 | PRJDB14275_P_NODE_6599_length_177_cov_2.376812_g6540_i0 | PRJDB14275 | 6599 | 177 | 2.376812 | 4.20695724 | Bacillati | 1783272 | Bacteria | Bacteria | 327 | 2.2199999999999996e-85 | NTclustered | gi|560878811|emb|HF678775.1| | 1371 | g6540 | i0 | 100 | 100 | 177 | 0 | 100 | 0 | 1 | 177 | 515 | 339 | Marinococcus halophilus partial 16S rRNA gene, isolate BDV4_S4_08a | blastn | 17700 | 327 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Marinococcus | Marinococcus halophilus | ||
| 24234464 | 24234464 | PRJDB14275_P_NODE_4340_length_256_cov_1.792627_g4281_i0 | PRJDB14275 | 4340 | 256 | 1.792627 | 4.58912512 | Anaerococcus sp. WGS1529 | 3366812 | Bacteria | Bacteria | 457 | 4.22e-124 | NTclustered | gi|2831325273|gb|CP171112.1| | 3366812 | g4281 | i0 | 98.828 | 86.67578125 | 256 | 3 | 100 | 0 | 1 | 256 | 663735 | 663990 | Anaerococcus sp. WGS1529 chromosome, complete genome | blastn | 22189 | 457 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. WGS1529 | ||
| 24234484 | 24234484 | PRJDB14275_P_NODE_6080_length_189_cov_2.760000_g6021_i0 | PRJDB14275 | 6080 | 189 | 2.76 | 5.2164 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 344 | 2.39e-90 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g6021 | i0 | 99.471 | 311.587301587302 | 189 | 1 | 100 | 0 | 1 | 189 | 9702 | 9514 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 58890 | 344 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 25207218 | 25207218 | PRJDB14275_P_NODE_7540_length_162_cov_1.000000_g7481_i0 | PRJDB14275 | 7540 | 162 | 1 | 1.62 | Staphylococcus | 1279 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2873239904|gb|CP176713.1| | 1280 | g7481 | i0 | 100 | 89.6481481481482 | 162 | 0 | 100 | 0 | 1 | 162 | 1456 | 1295 | Staphylococcus aureus strain GTVSS-008 plasmid pCFSAN137043_1, complete sequence | blastn | 14523 | 300 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;