RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJDB14275" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 5 ✖

bioproject 1

  • PRJDB14275 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3834752 3834752 PRJDB14275_P_NODE_1644_length_556_cov_2.400387_g1586_i0 PRJDB14275 1644 556 2.400387 13.34615172 Deinococcus radiophilus 32062 Bacteria Bacteria 835 0   NTclustered gi|2152123021|gb|CP086380.1| 32062 g1586 i0 94.364 223.838129496403 550 22 98 8 10 556 1813904 1813361 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome blastn 124454 835 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiophilus
16585454 16585454 PRJDB14275_P_NODE_6574_length_178_cov_1.359712_g6515_i0 PRJDB14275 6574 178 1.359712 2.42028736 Deinococcus radiophilus 32062 Bacteria Bacteria 313 6.259999999999999e-81   NTclustered gi|2152123021|gb|CP086380.1| 32062 g6515 i0 98.315 217.47191011236 178 3 100 0 1 178 1814572 1814395 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome blastn 38710 313 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiophilus
18832864 18832864 PRJDB14275_P_NODE_6335_length_183_cov_2.687500_g6276_i0 PRJDB14275 6335 183 2.6875 4.918125 Deinococcus 1298 Bacteria Bacteria 339 1.07e-88   NTclustered gi|2152123021|gb|CP086380.1| 32062 g6276 i0 100 102.956284153005 183 0 100 0 1 183 203310 203492 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome blastn 18841 339 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiophilus
20409243 20409243 PRJDB14275_P_NODE_6797_length_173_cov_1.888060_g6738_i0 PRJDB14275 6797 173 1.88806 3.2663438 Deinococcus proteolyticus 55148 Bacteria Bacteria 285 1.32e-72   NTclustered gi|324314064|gb|CP002536.1| 693977 g6738 i0 100 181.277456647399 154 0 89 0 20 173 95815 95968 Deinococcus proteolyticus MRP, complete genome blastn 31361 285 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus proteolyticus
25207238 25207238 PRJDB14275_P_NODE_920_length_799_cov_2.213158_g875_i0 PRJDB14275 920 799 2.213158 17.68313242 Deinococcus 1298 Bacteria Bacteria 1146 0   NTclustered gi|1220362168|gb|CP021081.1| 317577 g875 i0 92.938 350.620775969962 793 47 99 9 11 799 2341500 2342287 Deinococcus ficus strain CC-FR2-10, complete genome blastn 280146 1146 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;